Dryobates pubescens (Downy woodpecker): 104300379
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Entry
104300379 CDS
T08526
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub00310
Lysine degradation
dpub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104300379 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpub03000
]
104300379 (PRDM6)
03036 Chromosome and associated proteins [BR:
dpub03036
]
104300379 (PRDM6)
Enzymes [BR:
dpub01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
104300379 (PRDM6)
Transcription factors [BR:
dpub03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104300379 (PRDM6)
Chromosome and associated proteins [BR:
dpub03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104300379 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
Zap1_zf1
zf-C2H2_11
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
104300379
NCBI-ProteinID:
XP_009898960
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MRIVSPQVVSSSAYFLPCVVPEYREHERDALVDEGKTSPEREILGYPPGGAPAPLQGKAL
WGAGGGGSKCGERAAARFRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRNG
ECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICAAQRI
QQGTWIGPFQGVLLLPEKVQTGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRC
ARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVP
STVMEAMSRQDTLQPFNKSSKLSPATPQRSIVFPQTPCSRNFSLLDKSGSIESGFNQISV
KNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQ
SFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQ
ATQLSRHQRMPNECKPITESTESIEVD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgtctcgccacaggttgtatcttcctctgcgtacttcttgccctgtgttgtg
cccgagtatagagagcacgagagagacgcgctggtggacgaggggaaaacgtctccggag
agagaaattctggggtacccgccggggggagcgcccgcccccctacagggcaaggccttg
tggggggccggcggcggcggcagcaaatgcggcgagcgcgctgccgctcggttccggtgc
acggccgaggagctggactactacctgtatgggcagcagcgcatggagatcatccctttg
aatcagcacaccagtgaccccaacaacagatgtgatatgtgtgctgataaccgcaacggt
gagtgccccatgcatgggcccctccactccctgcgccgtctggtgggcaccagtagtgct
gctgcagctgcccctccacctgagatcccagagtggctccgggacctgccccgggaagtg
tgtctgtgcaccagcacagtgcctgggctggcctatggcatttgtgcagcacagcggatc
cagcaaggtacctggattgggccctttcagggagtcctgctcttgccagagaaggttcaa
acgggagccatcaggaacactcagcatctgtgggaaatatatgaccaagatgggacactg
cagcactttattgatggtggagaacccagtaagtcaagctggatgaggtatatccgatgt
gcaaggcactgtggggaacagaacttaactgtggttcagtacaggtcaaatatattctac
cgggcttgtatagacatcccaagaggcactgaactgttggtgtggtacaatgacagctac
acatctttctttggcatccctctccagtgcattgcacaagatgaaaacttgaatgtccct
tcgactgtaatggaggccatgtccagacaagacaccctacagccatttaataaaagtagc
aaactatcccctgccaccccccagcgatccatagtatttccacagactccgtgtagcagg
aatttttctctcctggataagtctgggtccatcgagtcaggatttaaccagatcagtgtc
aaaaaccagcgagttcttgcaagcccaacttcaacaagccaactaaattctgagttcagt
gactggcatctttggaaatgtgggcaatgctttaagactttcacccagcggatcctctta
cagatgcatgtgtgtacgcagaaccctgacaggccctaccagtgtggtcactgctcccag
tctttctcccaaccttcagagctgaggaatcacgtagttacacactccagtgacaggcct
ttcaagtgtggctactgcggtcgtgcctttgctggtgccacaacactcaacaatcacatc
cggacacatactggggaaaagcccttcaagtgcgagaggtgtgagaggagcttcacacaa
gccacccagctgagtcgacaccagaggatgcccaatgagtgcaagccaataacagagagc
acagaatcaattgaagtggattaa
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integrated database retrieval system
