Dryobates pubescens (Downy woodpecker): 104309680
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Entry
104309680 CDS
T08526
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
dpub
Dryobates pubescens (Downy woodpecker)
Pathway
dpub04142
Lysosome
dpub04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dpub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104309680
04142 Lysosome
104309680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpub04131
]
104309680
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpub04147
]
104309680
Membrane trafficking [BR:
dpub04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104309680
Exosome [BR:
dpub04147
]
Exosomal proteins
Proteins found in most exosomes
104309680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
Motif
Other DBs
NCBI-GeneID:
104309680
NCBI-ProteinID:
XP_009909335
LinkDB
All DBs
Position
Unknown
AA seq
1622 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMSDPTTPIRRPISAESAIMNPASKVIALKAGKTLQIF
NIEMKSKMKAHTMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAGC
QIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNAK
PSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGVKHG
VIYLITKYGYIHMYDLESGVCIYMNRISADTIFVTAPHEPTSGIIGVNKKGQVLSVCVEE
DNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKGI
LRTSDTIRKFQSVPAQPGQASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEKW
LKEDKLECSEELGDLVKAADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVKLF
PDLICLLRSVMRVSPEQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDALK
NNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHVAQLCEKAGLLQRALEHYT
DLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYHE
QLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRES
NCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSR
IPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCE
EPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACIAYERGQCDLELI
KVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSVT
VKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYD
APDIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQL
ARAQLQKDLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVET
ELIFALAKTNRLSELEEFISGPNNAHIQQVGDRCYEEGMYEAAKLLYNNVSNFARLASTL
VHLGEYQAAVDSGRKANSTRTWKEVCFACVDGKEFRLAQICGLHIVIHADELEELISYYQ
DRGYFEELIGLLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRA
AEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQFY
LDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNQLLLVKPYLRSVQNHNNKGVNEALNNLL
TEEEDYQGLRASIDAYDNFDNITLAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKKD
HLYKDAMQYAAESKDAELAEKLLQWFLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKV
DKLDASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGF
NM
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgacaagttcatctgcatcagggagaaagtgggagagcaggcacaagtagtg
ataattgacatgagtgatccaaccacacccatcagacggccaatttctgctgaaagtgcc
atcatgaatccagcctccaaagtaattgctctaaaagctgggaaaacacttcagatcttt
aacattgagatgaaaagtaaaatgaaagcccacacaatggcagaggaagtgatcttctgg
aaatggatatctgtgaatacagttgccttggtgacagagacagcagtctaccactggagc
atggagggagaatcccaaccccaaaagatgtttgacagacatgctagtcttgcaggctgc
caaatcatcaactacagaacagatgaacaccaaaaatggctgctgctgataggaatttca
gctcagcaaaatcgtgtggttggtgcaatgcagctgtactcagttgatagaaaagtctcc
caacctatagagggccatgcagcagcttttgcagaattcaaaatagagggaaatgccaaa
ccttctaccctcttctgttttgctgtgaggagtcctgctggaggcaagctacacataatt
gaagtaggtcagccagctactggaaaccagccatttgttaagaaagctgttgatgtgttt
ttcccacctgaggcacagacagactttcctgtggcaatgcagattggagttaagcatggt
gttatctacctgatcaccaagtatggctatatccacatgtacgacttggagtctggtgtc
tgcatctacatgaaccgcatcagtgccgacacgatcttcgtcacagctcctcatgaacct
acctcaggcattattggtgtgaacaaaaaaggacaggtgctttctgtatgtgttgaggaa
gacaacatagtgaactatgctacaaatgttctccagaatcctgacttgggcctgcgtatg
gcgatacgtagcaatctagctggggcagaggagctatttgctaggaagttcaacacactg
tttgctcaaggaagctatgcagatgctgctaaagtggctgcctctgcaccaaagggaatt
ctgcgtaccagtgacaccatcaggaagttccagagtgtaccagctcaacctgggcaggcc
tctcccctgctccagtactttggaatattgcttgaccaggggcagctgaacaaatttgag
tctctggagctgtgccgccctgtcctacagcagggccgcaagcagcttctggagaagtgg
ctgaaggaagacaagctggagtgctcagaggagctgggagacctggtgaaggctgctgac
ccaacccttgcactcagtgtctaccttcgtgctaatgtgccaaacaaagtgatccagtgc
tttgctgaaactggtcagttccagaaaatagtgctgtatgctaaaaaggtaaagttgttt
ccagacttgatctgccttctgagaagtgtgatgagagtcagtccagagcaaggcctgcag
ttctctcagatgctagtacaggatgaggagccactggctaacattaaccagattgtggat
gtgttcatggagaacagcctcattcagcagtgcacatccttcctcttggatgccctgaaa
aacaaccgccctgcagaaggccaccttcagactcgtctcctggaaatgaatttgatccat
gccccgcaggttgcagatgccattcttgggaaccaaatgtttacacattatgatcgtgcc
cacgttgcccagctgtgtgagaaggcaggcctgctccaaagagctctggagcactacacc
gatctctatgacattaaacgtgctgtcgttcacactcacctcttgaatcctgagtggctt
gtgaacttctttggctctctctcagttgaagactctgtggagtgcttgcgtgccatgctg
tcagccaacattaggcaaaacctacagctctgtgtgcaagttgcttctaagtaccatgag
cagcttggtacccagtctcttgtggagctctttgaatctttcaaaagctacgaagggctg
ttctatttcttgggttccattgtaaacttcagccaggatccagatgttcacttcaagtac
atccaggcagcttgcaagactggtcagataaaggaagtggagagaatttgccgtgaaagc
aactgctataacccagagagggtgaagaattttctgaaggaggcaaagctcaccgaccag
ctgcctctgatcattgtctgtgatcgatttgactttgttcatgacctggtgctctactta
taccgcaacaacctgcagaagtatatcgagatctatgtgcagaaggtgaatcctagccgt
ataccagcagtggttggagggcttcttgatgtggattgttctgaagatgtcattaagaac
ttgatcatggtggttagaggccagttctcaacagatgagttggtggctgaagtggaaaag
agaaatcggcttaagctgctgttgccgtggctggaatcgaggattcacgaaggctgtgaa
gagccagcgactcacaacgccttggccaagatctatattgacagcaacaataaccccgag
cgcttcctccgcgagaacccttactacgatagccgtgtggttggcaaatactgtgagaag
agggaccctcacctggcctgcattgcttatgagagagggcagtgtgatctggagctcatc
aaggtgtgcaatgagaactctctgttcaagagtgaggctcgctatctggtgcgcaggaag
gaccctgagctctgggcaaatgttctggaagaaaacaaccccttcaggaggcaacttatt
gaccaggtcgttcaaacagctttatcagagacacaggatcctgaggaggtttctgtcact
gtgaaagctttcatgactgctgacctgcctaatgagctgattgagttactggaaaaaatt
gtcttggataattctgtattcagtgaacacaggaatctgcagaacctgctgatcctgact
gccattaaggctgaccgcactcgtgtgatggaatacatcaaccggctggacaactatgat
gcccctgacatcgccaacattgccatcagcaatgagctctacgaagaagcctttgctata
tttaggaaatttgatgttaatacttcagctattcaggtgctgattgagcacattggcaac
ttagaccgtgcttatgaatttgcagagagatgcaatgagcctgcagtatggagccagcta
gccagagcacagctccagaaggacttggtgaaagaagctattgactcctatataaaggca
gatgatccctctgcctatatggaagttgtgcaagcggctaatagaaatgataactgggag
gacctagtcaagttcttacagatggccaggaagaaggctagagagtcttatgtagagaca
gaacttatttttgctttggcaaaaactaatcgtctgtcagaactggaggagtttattagt
ggccctaataatgcccatatacaacaggtcggcgatcgctgttacgaggaggggatgtac
gaagcagccaagctcctctataacaatgtctccaactttgctcgcctggcttccaccttg
gtgcacctgggggagtaccaggcagcggtggacagtggccgcaaagccaacagcaccagg
acttggaaggaggtttgcttcgcctgcgtggatgggaaggaattccgcttggcacagatc
tgtggcttacacatagtcatccatgctgatgaacttgaggagctgatcagttactaccag
gatcgtggctattttgaggagctgattggccttttggaagctgctttgggccttgagcgt
gctcacatgggaatgtttactgagcttgccatcttgtactccaaattcaagcctcagaaa
atgagggaacacctggagctcttctggtctagagttaatatcccaaaggtgctcagagct
gcagaacaggctcatctctgggcagaacttgtattcctctatgacaaatatgaggagtat
gataatgcaataattactatgatgaatcatcccactgatgcctggaaagaagggcagttt
aaagacatcattgccaaggtggccaatgtggagctgtactacaaagccttgcaattctac
ttagactacaaacctctgttgatcaacgatctcctgcttgtattatctccacgactggat
cacaccaggacagtcaattttttctcaaaggtcaatcagctactcctagtaaagccttac
ctgcgttcagtccagaaccacaacaacaaaggagttaatgaagctctaaacaaccttcta
acagaggaggaagattaccagggtttgagagcctccattgatgcctatgataactttgac
aacataactctggcccagcggctggagaagcatgagctgatcgagttcaggaggattgca
gcctacctctacaaaggcaacaaccgctggaagcagagcgtggagctctgcaagaaagac
catctctacaaggatgctatgcagtatgctgcagagtccaaagatgcagagctagctgag
aagctgcttcaatggttcctgcacccagatgtagtcctcgagttggcatggaggcataac
atcatggactttgcaatgccttatttcatccaagtgatgagagaataccttaccaaagtg
gataaacttgatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccact
ccaatagtatttggccagcagctgatgttaacagcaggccccagtgcagtacctccccag
gcaaacttcccatatggatacacagcgccaggattcacccagccgcccgtttatggtttc
aacatgtaa
DBGET
integrated database retrieval system