KEGG   Dryobates pubescens (Downy woodpecker): 104309680
Entry
104309680         CDS       T08526                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
dpub  Dryobates pubescens (Downy woodpecker)
Pathway
dpub04142  Lysosome
dpub04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:dpub00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104309680
   04142 Lysosome
    104309680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dpub04131]
    104309680
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dpub04147]
    104309680
Membrane trafficking [BR:dpub04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    104309680
Exosome [BR:dpub04147]
 Exosomal proteins
  Proteins found in most exosomes
   104309680
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link Coatomer_WDAD
Other DBs
NCBI-GeneID: 104309680
NCBI-ProteinID: XP_009909335
LinkDB
Position
Unknown
AA seq 1622 aa
MESDKFICIREKVGEQAQVVIIDMSDPTTPIRRPISAESAIMNPASKVIALKAGKTLQIF
NIEMKSKMKAHTMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAGC
QIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNAK
PSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGVKHG
VIYLITKYGYIHMYDLESGVCIYMNRISADTIFVTAPHEPTSGIIGVNKKGQVLSVCVEE
DNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKGI
LRTSDTIRKFQSVPAQPGQASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEKW
LKEDKLECSEELGDLVKAADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVKLF
PDLICLLRSVMRVSPEQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDALK
NNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHVAQLCEKAGLLQRALEHYT
DLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYHE
QLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRES
NCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSR
IPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCE
EPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACIAYERGQCDLELI
KVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSVT
VKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYD
APDIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQL
ARAQLQKDLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVET
ELIFALAKTNRLSELEEFISGPNNAHIQQVGDRCYEEGMYEAAKLLYNNVSNFARLASTL
VHLGEYQAAVDSGRKANSTRTWKEVCFACVDGKEFRLAQICGLHIVIHADELEELISYYQ
DRGYFEELIGLLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRA
AEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQFY
LDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNQLLLVKPYLRSVQNHNNKGVNEALNNLL
TEEEDYQGLRASIDAYDNFDNITLAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKKD
HLYKDAMQYAAESKDAELAEKLLQWFLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKV
DKLDASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGF
NM
NT seq 4869 nt   +upstreamnt  +downstreamnt
atggaatctgacaagttcatctgcatcagggagaaagtgggagagcaggcacaagtagtg
ataattgacatgagtgatccaaccacacccatcagacggccaatttctgctgaaagtgcc
atcatgaatccagcctccaaagtaattgctctaaaagctgggaaaacacttcagatcttt
aacattgagatgaaaagtaaaatgaaagcccacacaatggcagaggaagtgatcttctgg
aaatggatatctgtgaatacagttgccttggtgacagagacagcagtctaccactggagc
atggagggagaatcccaaccccaaaagatgtttgacagacatgctagtcttgcaggctgc
caaatcatcaactacagaacagatgaacaccaaaaatggctgctgctgataggaatttca
gctcagcaaaatcgtgtggttggtgcaatgcagctgtactcagttgatagaaaagtctcc
caacctatagagggccatgcagcagcttttgcagaattcaaaatagagggaaatgccaaa
ccttctaccctcttctgttttgctgtgaggagtcctgctggaggcaagctacacataatt
gaagtaggtcagccagctactggaaaccagccatttgttaagaaagctgttgatgtgttt
ttcccacctgaggcacagacagactttcctgtggcaatgcagattggagttaagcatggt
gttatctacctgatcaccaagtatggctatatccacatgtacgacttggagtctggtgtc
tgcatctacatgaaccgcatcagtgccgacacgatcttcgtcacagctcctcatgaacct
acctcaggcattattggtgtgaacaaaaaaggacaggtgctttctgtatgtgttgaggaa
gacaacatagtgaactatgctacaaatgttctccagaatcctgacttgggcctgcgtatg
gcgatacgtagcaatctagctggggcagaggagctatttgctaggaagttcaacacactg
tttgctcaaggaagctatgcagatgctgctaaagtggctgcctctgcaccaaagggaatt
ctgcgtaccagtgacaccatcaggaagttccagagtgtaccagctcaacctgggcaggcc
tctcccctgctccagtactttggaatattgcttgaccaggggcagctgaacaaatttgag
tctctggagctgtgccgccctgtcctacagcagggccgcaagcagcttctggagaagtgg
ctgaaggaagacaagctggagtgctcagaggagctgggagacctggtgaaggctgctgac
ccaacccttgcactcagtgtctaccttcgtgctaatgtgccaaacaaagtgatccagtgc
tttgctgaaactggtcagttccagaaaatagtgctgtatgctaaaaaggtaaagttgttt
ccagacttgatctgccttctgagaagtgtgatgagagtcagtccagagcaaggcctgcag
ttctctcagatgctagtacaggatgaggagccactggctaacattaaccagattgtggat
gtgttcatggagaacagcctcattcagcagtgcacatccttcctcttggatgccctgaaa
aacaaccgccctgcagaaggccaccttcagactcgtctcctggaaatgaatttgatccat
gccccgcaggttgcagatgccattcttgggaaccaaatgtttacacattatgatcgtgcc
cacgttgcccagctgtgtgagaaggcaggcctgctccaaagagctctggagcactacacc
gatctctatgacattaaacgtgctgtcgttcacactcacctcttgaatcctgagtggctt
gtgaacttctttggctctctctcagttgaagactctgtggagtgcttgcgtgccatgctg
tcagccaacattaggcaaaacctacagctctgtgtgcaagttgcttctaagtaccatgag
cagcttggtacccagtctcttgtggagctctttgaatctttcaaaagctacgaagggctg
ttctatttcttgggttccattgtaaacttcagccaggatccagatgttcacttcaagtac
atccaggcagcttgcaagactggtcagataaaggaagtggagagaatttgccgtgaaagc
aactgctataacccagagagggtgaagaattttctgaaggaggcaaagctcaccgaccag
ctgcctctgatcattgtctgtgatcgatttgactttgttcatgacctggtgctctactta
taccgcaacaacctgcagaagtatatcgagatctatgtgcagaaggtgaatcctagccgt
ataccagcagtggttggagggcttcttgatgtggattgttctgaagatgtcattaagaac
ttgatcatggtggttagaggccagttctcaacagatgagttggtggctgaagtggaaaag
agaaatcggcttaagctgctgttgccgtggctggaatcgaggattcacgaaggctgtgaa
gagccagcgactcacaacgccttggccaagatctatattgacagcaacaataaccccgag
cgcttcctccgcgagaacccttactacgatagccgtgtggttggcaaatactgtgagaag
agggaccctcacctggcctgcattgcttatgagagagggcagtgtgatctggagctcatc
aaggtgtgcaatgagaactctctgttcaagagtgaggctcgctatctggtgcgcaggaag
gaccctgagctctgggcaaatgttctggaagaaaacaaccccttcaggaggcaacttatt
gaccaggtcgttcaaacagctttatcagagacacaggatcctgaggaggtttctgtcact
gtgaaagctttcatgactgctgacctgcctaatgagctgattgagttactggaaaaaatt
gtcttggataattctgtattcagtgaacacaggaatctgcagaacctgctgatcctgact
gccattaaggctgaccgcactcgtgtgatggaatacatcaaccggctggacaactatgat
gcccctgacatcgccaacattgccatcagcaatgagctctacgaagaagcctttgctata
tttaggaaatttgatgttaatacttcagctattcaggtgctgattgagcacattggcaac
ttagaccgtgcttatgaatttgcagagagatgcaatgagcctgcagtatggagccagcta
gccagagcacagctccagaaggacttggtgaaagaagctattgactcctatataaaggca
gatgatccctctgcctatatggaagttgtgcaagcggctaatagaaatgataactgggag
gacctagtcaagttcttacagatggccaggaagaaggctagagagtcttatgtagagaca
gaacttatttttgctttggcaaaaactaatcgtctgtcagaactggaggagtttattagt
ggccctaataatgcccatatacaacaggtcggcgatcgctgttacgaggaggggatgtac
gaagcagccaagctcctctataacaatgtctccaactttgctcgcctggcttccaccttg
gtgcacctgggggagtaccaggcagcggtggacagtggccgcaaagccaacagcaccagg
acttggaaggaggtttgcttcgcctgcgtggatgggaaggaattccgcttggcacagatc
tgtggcttacacatagtcatccatgctgatgaacttgaggagctgatcagttactaccag
gatcgtggctattttgaggagctgattggccttttggaagctgctttgggccttgagcgt
gctcacatgggaatgtttactgagcttgccatcttgtactccaaattcaagcctcagaaa
atgagggaacacctggagctcttctggtctagagttaatatcccaaaggtgctcagagct
gcagaacaggctcatctctgggcagaacttgtattcctctatgacaaatatgaggagtat
gataatgcaataattactatgatgaatcatcccactgatgcctggaaagaagggcagttt
aaagacatcattgccaaggtggccaatgtggagctgtactacaaagccttgcaattctac
ttagactacaaacctctgttgatcaacgatctcctgcttgtattatctccacgactggat
cacaccaggacagtcaattttttctcaaaggtcaatcagctactcctagtaaagccttac
ctgcgttcagtccagaaccacaacaacaaaggagttaatgaagctctaaacaaccttcta
acagaggaggaagattaccagggtttgagagcctccattgatgcctatgataactttgac
aacataactctggcccagcggctggagaagcatgagctgatcgagttcaggaggattgca
gcctacctctacaaaggcaacaaccgctggaagcagagcgtggagctctgcaagaaagac
catctctacaaggatgctatgcagtatgctgcagagtccaaagatgcagagctagctgag
aagctgcttcaatggttcctgcacccagatgtagtcctcgagttggcatggaggcataac
atcatggactttgcaatgccttatttcatccaagtgatgagagaataccttaccaaagtg
gataaacttgatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccact
ccaatagtatttggccagcagctgatgttaacagcaggccccagtgcagtacctccccag
gcaaacttcccatatggatacacagcgccaggattcacccagccgcccgtttatggtttc
aacatgtaa

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