Daphnia pulex (common water flea): DAPPUDRAFT_112010
Help
Entry
DAPPUDRAFT_112010 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K10297
F-box protein 11
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpx04121
]
DAPPUDRAFT_112010
Ubiquitin system [BR:
dpx04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
DAPPUDRAFT_112010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
F-box
zf-UBR
F-box_5
Motif
Other DBs
NCBI-ProteinID:
EFX71222
JGI:
Dappu1_112010
UniProt:
E9HAQ2
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MPSPSLRSPLYSLRRSKRKGTKRGAAASNNSRVNSANNENPVSGSVAPQPVVPSAVGLVT
GGASAAGHQPPYDLRRKSPHHDPAAAAVAPNYPSGCNPSGSLSSNSACAAGPSGYATSML
PARKRPRRTCYTSSEIDEQRSAAHYLQYELPDEVLICIFSYLFERDLCRVSQVCKRFQSI
ANDTELWKTLYQRVFEYDTPLFHTGICKYEFIAIEESEYDNPWKESFKQLNHGVHVRPGF
QEKALKYPSRYKGRSIAYFDTIQSALEFFDDAESPLVFVHKGSYQREYLVVENNVNILGC
SSGNVAENVTIERDTESTVTFMEGARSSYLGYVTLKFSPDISSSVPHHKHYCLEIGENCS
PVIDHCIIRSSSVVGAAVCVTGSGAEPIIRRCDISDCENVGLYITDHAQGLYEDNEISRN
ALAGIWVKNHANPVMRRNHIHHGRDVGIFTFDNGLGYFESNNIHNNRIAGFEVKAGANPT
VVRCEIHHGQTGGIYVHESGQGQFIENRIHSNNFAGVWITSNSNPTIRRNEIYNGHQGGV
YIFGEGRGLIEHNNIYGNALAGIQIRTNSDPIVRHNKIHHGQHGGIYVHEKGQGLIEENE
VYANTLAGVWITTGSTPVLRRNRIHSGKQVGVYFYDNGHGRLEDNDIFNHLYSGVQIRTG
SNPIIRRNKIWGGQNGGVLVYNGGLGLLEQNEIFDNAMAGVWIKTDSNPTLKRNKIYDGR
DGGICIFNGGKGILEENDIFRNAQAGVLISTQSHPILRRNRIFDGLAAGIEITNNATATL
EFNQIFNNRFGGLCLASGVTPICKGNKIFNNQDAVEKAVNGGQCLYKISSYTSFPMHDFY
RCRTCNTTDRNAICVNCIKTCHAGHDVEFIRHDRFFCDCGAGTLTNQCQLQGESTQDTDT
LYDSAAPVESHTVMVN
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtccctcgctgcgttcacccctctactccctgagaaggtcgaaacggaagggc
accaagagaggtgctgctgccagcaataactcccgcgtcaactctgccaacaatgaaaat
ccagtctcaggatctgttgctcctcaacctgttgtcccttcggctgttggtttagtcacc
ggtggggcctcagctgccggacaccaaccaccttatgatctgaggcgcaagtcaccacat
catgaccctgccgctgcagctgtagcacccaactacccatcaggctgtaatccgagtggc
agcctttcgtcaaattcagcttgtgcagctggtcccagtggctatgcaacgagtatgcta
cctgcaagaaagaggcccagaagaacctgctacacatcatctgagattgatgagcaaaga
agtgcagctcattacctccagtatgaattacctgatgaagttctcatatgcatattcagt
tatctgtttgagagagatttatgtcgggtcagtcaagtctgtaaacgtttccagagtata
gctaacgacaccgagctttggaaaacgttgtatcagcgcgtttttgagtacgacacgcca
ttgtttcacacgggaatctgcaaatacgaatttatagcgatagaagaatccgaatacgac
aatccttggaaagagagcttcaaacaactcaatcacggcgtccacgtcaggccgggattt
caagaaaaggcccttaaatacccgtcacgctacaaaggtcgttcgattgcctatttcgat
acgatccagtcggcgctggaatttttcgacgacgctgagagtccgctcgtgttcgttcac
aagggatcctaccagcgcgaatacctggtagtggagaacaacgtcaacattttaggttgt
tcttcgggtaacgtggccgaaaacgttaccatcgaacgagacacggaatcgacggtgacg
tttatggaaggtgcgagatcttcctacctgggctacgtcacgctcaagttcagtccagat
atctcatcgtctgttccgcatcacaaacattactgccttgaaattggagagaattgctca
cccgttatcgaccattgcatcatccgcagcagctccgtcgtgggcgccgctgtatgtgta
accgggtccggtgcggaacccattatccgccgttgcgacatatccgactgcgagaacgtt
ggcctttacatcaccgaccacgctcagggtctttatgaggacaacgaaatcagccgcaac
gctctggcgggcatctgggtgaaaaatcacgccaatccggttatgagaaggaatcatatc
catcacggccgagacgtcggcatcttcaccttcgacaacggactaggctatttcgagagt
aacaatatccacaacaacagaatcgccggctttgaagtgaaagcaggagcaaacccgact
gtggtgcggtgtgaaatccatcacggccaaacggggggcatttacgttcacgaatccggt
cagggccaattcattgaaaaccggattcattccaacaactttgcgggcgtttggatcacc
tcaaattcaaatccgaccatccgtcggaatgaaatctacaacggccaccaaggcggcgtt
tacatatttggagaaggccgcggtctgattgagcacaacaatatttacggcaacgctctt
gcaggcatacagatccgcaccaacagtgatccaatcgtgcggcacaataaaatccatcac
ggccaacacggtggcatctacgtccacgaaaagggccagggactcatagaagaaaatgaa
gtttacgccaataccctggctggagtctggataaccacaggatcgactcctgttttaagg
cgaaaccgaattcattctggcaagcaagtgggtgtctatttttacgataatggacatggc
cgtctcgaagacaacgatatcttcaatcatctgtacagtggtgtgcagattcgaacgggg
agcaatcccatcattcgccggaacaagatttggggtggacaaaacggcggagttctcgtc
tacaatggaggactcggcctgttggaacagaacgaaatctttgataacgcaatggctgga
gtctggataaaaacagattcgaatccgacattaaagcgcaataaaatctacgacggaaga
gacggtggaatctgcatctttaacggtggtaaaggaatcttggaagaaaacgatatcttc
cgcaacgcgcaggccggagttttgatctcaacgcaatcgcacccgatccttcggcgaaat
cgtattttcgacgggctagcggcgggcatcgagattactaacaacgcgacggccacatta
gaattcaaccagatcttcaacaaccgatttgggggattgtgcctggcatcgggtgtcaca
cctatttgtaaagggaacaagatctttaataaccaagacgcggttgaaaaggccgtgaat
ggtggtcagtgtctttacaagatctcttcctacacatccttcccgatgcacgatttctac
cgctgtcgcacctgcaacacaacggaccggaacgctatttgcgtcaattgtatcaaaacg
tgtcatgccgggcacgacgtggagtttatccgtcacgatcgctttttttgcgactgcggg
gccggcacgttgaccaaccagtgccaactacagggagagtctacgcaagacaccgacaca
ctttacgactcggcagcgcccgtagagtctcatacagtgatggtcaattag
DBGET
integrated database retrieval system
