Daphnia pulex (common water flea): DAPPUDRAFT_304337
Help
Entry
DAPPUDRAFT_304337 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpx03019
]
DAPPUDRAFT_304337
04121 Ubiquitin system [BR:
dpx04121
]
DAPPUDRAFT_304337
Enzymes [BR:
dpx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
DAPPUDRAFT_304337
Messenger RNA biogenesis [BR:
dpx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DAPPUDRAFT_304337
Ubiquitin system [BR:
dpx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
DAPPUDRAFT_304337
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
Motif
Other DBs
NCBI-ProteinID:
EFX79740
JGI:
Dappu1_304337
UniProt:
E9GKU4
LinkDB
All DBs
Position
Unknown
AA seq
1319 aa
AA seq
DB search
MEQFDQLLTCCVCLDRYRNPKLLPCQHSFCMEPCMEGLINYVTRQVKCPECRAEHRIPYQ
GIAAYPTNVTLQRFLELHIEITGELPDPTSGQIMERCGVCSEKNYCTLCCHCDKKVCSDC
KEGHLDILRREIARVNNQVRRTLPRLQDALGVIDKNSTQLQTNCLSIIEEVDGLYRRLSK
ALKDRTDHIKGEIEAFMSKELKAMTGLRANLEHEISNFDSNSEFAEKHVTAGTGGTEGGS
SVSSSSASTVAWDDNELMDTKDIFLRTMEFIRNFETETGDYHRRVRFFVPQDPNQLSNTL
ANLGELTILQGPSSSSGQGPPTAPSLGPGLMRSKSDHRVAAAFRQQEERYNSMAYGSDNN
DDIGGGSSGRPRYFGERHGSVSTRAIDRYDTSSSRRNDYGDYEEPDSGRRKFRSRFMRHH
DSGDSDNEPAGRSVRFQAGDAGDPSANKKERLKVLDTEDAARGPLSGITRLTDSPRVIKR
LQEVGRKKKATPPTTLNLPTPATNQQSLSSPSSRIPPRPTAAARQVSEEDEIAKIKKQNK
GQEASSSSDSARKTDATPSTPTGAGERPRFSSQQSSNSSEQQQGSKNPAASRQTSTTGSE
ASQKTPAESSSSSGATPTNETPEEARTRRRSLLAGGSKSGTSTPNDTESESRQKDRTAVA
STAAAAAAASNGTAATGAAPHRFQSRFLGRAGTPTAEASRGSENSQSSSSDDSSDSAQAR
DTSTYPSSSSSTNHTGSSSGNSRPTSSDSPSSYTPRSRANASAAATPSSSSSRPYSSSSR
FGTTDSSTTGSALSRSRTGSALADDMENKYPGYQSRFLNKSKSSAALDCAPDGGNEVAND
DDEEDAMDDNDDDYNKSGRSRYAALKDRRSRLARSKSSHDVGPPAPLSPTGPSSSSSSQL
TGGDGVAGGRASDPHYHQHGQLGGEVGDTGTSSLEPTSPSAESASGSSLSTWARYLKNKY
GPRNKEGDGQPPSATTNSDSTTTAGGGKQAQPTSSRFSRARSIGVSGNNAANGRRNSEDV
TGPPPSGLITSSSRHQYMQKRKVLMKMGTRGSEAGAFTWPRGVAVAPDNSIVVADSSNHR
VQVFDSTGKFLKEFGYYGNGEGEFDCLAGVAINRIGQYIIADRYNHRIQVFDPSGRFLRV
FGSQGTTDGKFSYPWGVTTDALGFIYVCDKENHRVQVFQSDGTFVGKFGTMGNRPGQLEH
PHYIAVSSTNRVIVSDSNNHRIQVFDVNGKVIASFGGEGADEGQFKFPRGVAVDDQGYIV
VADSGNNRIQVFTADGVFVKAFGCWGSGDGEFKGLEGIAVMSNGNIVCADRENHRIQVF
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtttgatcagttgctgacttgctgcgtttgcctggaccgttaccgcaacccc
aaactgctaccatgtcagcactcgttctgcatggagccttgtatggagggcctcatcaac
tacgtcactcgccaggtcaaatgtccggaatgcagagccgagcaccgaatcccttatcaa
ggaattgcggcttatccgaccaacgtgacattgcagcgctttctcgagctacacatcgaa
atcaccggagagttgcccgaccccaccagcggtcagatcatggaacgttgtggagtttgc
tcggagaaaaactattgcacgctctgctgtcactgcgacaagaaagtctgcagcgattgc
aaggagggccatttggacatcctgagacgggaaatcgctcgagtcaacaaccaggtgcgg
aggactttgcctcggctgcaggacgctctaggagtcatcgacaagaactcgactcagctg
caaaccaactgcttgtccatcatcgaggaagtcgacggtctttacaggcgactctccaag
gcgctcaaagaccggacggaccacatcaaaggcgaaatcgaggcctttatgtcgaaagag
ctcaaggccatgactgggctgcgggccaacctggagcacgagatctcaaattttgactcg
aattccgaattcgccgaaaagcacgtcacggccggaacgggcggcaccgaaggtgggtcg
tccgtctcctcctcgtcggccagcacggtcgcctgggacgacaacgagctcatggacacc
aaagacatcttcctgcgcaccatggagtttatccgcaatttcgaaacggaaacgggcgac
taccaccggcgggtgcggttctttgtcccgcaggatcccaatcagctgtccaacaccctg
gccaacttgggcgaactaaccatcctccaaggtccgtcttcatcttcaggccagggtccg
cccacggccccgtccctgggaccgggattgatgcggagtaaaagcgatcaccgagtggcg
gccgccttccgccagcaggaggagcgctacaacagcatggcctacggatcggacaacaac
gacgatatcggcggcggaagcagcggacggccgcgctatttcggcgagagacacggaagt
gtcagcactcgagccatcgaccgatacgacacgtcgtcgtctcgtcgaaacgactacggc
gattacgaggagccggacagcggccgtcgtaaattccgctcacgtttcatgcgccatcac
gactcgggcgattcggataacgagccggccggccgttctgttcgctttcaggcgggcgac
gctggcgatccatcggctaacaagaaggaacgtcttaaggtcctggacacggaagatgcc
gccaggggaccgctcagtggcattacgcgtctgacggattcgccgcgggtcatcaaacgg
ctccaggaggtgggcaggaaaaagaaagcgaccccaccgaccacgctcaatttgccaacg
ccggccaccaatcagcagtcgctgtccagtccgtcgagccgcataccgccccgtcccacc
gctgccgcccgccaagtgagcgaagaagatgaaatcgccaagatcaagaagcagaacaaa
ggacaggaagcttcttcttcttccgacagcgctcgaaaaacggatgccactccgtcgact
ccgacgggagctggcgagcggccaagattctccagccagcagagcagcaattcgtcagag
cagcagcagggcagtaaaaatccagcggcctcgaggcaaacctcgacgaccggctcggaa
gcctcgcaaaagactccggcggaatcatccagcagctccggggccacgcccaccaatgaa
acaccagaagaagcgcgaacgcggagaaggtccttgttggccggcggaagcaagagcggg
acgtcgacacccaacgacaccgagtccgagtccaggcagaaggatcgaacagctgtggcg
tccactgctgctgctgctgctgccgctagcaatggaacagctgcgacgggagcagccccc
caccgatttcagagtcgttttttaggccgggctggcactcctacagcagaggcctcgagg
ggatccgagaatagtcagagtagctcatccgacgacagttcagattctgcacaggctcgt
gacacatccacctatcccagtagtagtagtagcaccaatcacaccggtagtagctccggt
aatagtagaccaacatcatccgactcgccttcctcctacacgccgaggagccgagccaat
gcctcagcggcggctaccccatcatcatcatccagccggccctacagttcctcctctcgt
ttcggaacgaccgactcgtcgacaaccggatcggccttgtccaggagcaggacgggctcg
gcgctggccgacgatatggagaacaagtatccaggctatcagagtcgttttttaaacaaa
agtaagagctctgctgcgctagactgcgcaccggacggcggcaacgaagtggccaacgac
gacgacgaggaagacgcgatggacgacaacgacgacgactacaacaagtccggcaggtcg
agatatgcagcccttaaggaccgccgatcccggcttgcccgcagcaagagctctcacgat
gtggggccacccgctcccctgtcgcccacggggccgtcgtcgtcttcgtcgagtcaattg
acgggcggcgacggcgtcgctggcggcagggcatcggacccacactatcatcagcacggt
cagctgggcggagaagtcggggataccgggacttcttcgctggaaccaacatcgccttca
gctgaatccgcttcaggatcttccttatccacttgggcgcgctatttaaagaacaagtac
gggcccaggaataaagaaggagacggccagccaccgtcagccacgaccaacagcgattcg
acgacgacggccggaggagggaaacaagcgcagccgacgtcgtcgcgattcagccgcgcc
cgatctatcggcgtctccggaaacaacgcggccaacggacgacgcaactcggaagacgtt
acaggaccaccgccgtcgggattgattacatcctcgtccagacaccagtacatgcaaaag
cggaaggtcctgatgaagatgggaacccgcggcagcgaagccggagccttcacctggccc
cgcggcgttgccgtggctcccgacaactccatcgtcgtggcggacagctccaatcatcgg
gtgcaggtgtttgattccactggcaaattcttgaaagagtttggctattacggaaacggt
gaaggcgagtttgactgcttggccggcgttgccatcaaccgaattggccagtacattatc
gcggataggtataatcacagaatccaggtgttcgatccgtcgggccgcttcttgcgggtc
tttggctcgcaaggaacgaccgacggcaagttcagctatccctggggcgtcacaaccgac
gctcttggtttcatttacgtctgcgataaggaaaaccatcgagtgcaggtcttccagtca
gatggaacttttgtcggcaaattcggcacaatgggcaatcggcccggccagctggaacat
ccgcactacatagccgtcagcagtaccaatcgcgtcattgtttcggactcgaacaatcac
cgaattcaagtctttgacgtcaatggcaaagtaatcgcttcgtttggtggcgagggagca
gacgagggacaatttaagtttcccaggggagtagccgtggacgaccaaggctacatcgtc
gtggctgattcgggtaacaaccgcatccaagtgttcaccgctgacggcgttttcgtaaaa
gctttcggatgctggggctccggagacggagaattcaaaggacttgaaggcatcgccgtc
atgtcaaacggcaatatagtctgcgccgatcgagaaaaccatcgaattcaagtattttaa
DBGET
integrated database retrieval system
