Daphnia pulex (common water flea): DAPPUDRAFT_97204
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Entry
DAPPUDRAFT_97204 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
dpx
Daphnia pulex (common water flea)
Pathway
dpx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DAPPUDRAFT_97204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpx03009
]
DAPPUDRAFT_97204
Ribosome biogenesis [BR:
dpx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DAPPUDRAFT_97204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PALB2_WD40
DPPIV_N
Motif
Other DBs
NCBI-ProteinID:
EFX86991
JGI:
Dappu1_97204
UniProt:
E9G0Z1
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MDKNLFKIHSTRFYDVEPKAIHSMAYESNRLALSRSDNSIEIWNLEHSPHIEKLIPGSPE
GSIEALVWSKGRLFSTGLHGFVVEYDLVALSPKASYAVTSGSAWCLAVNKAHTHLAAGSE
EGYVCLFEIFEEGLMYYKVFDKQEGRILSLSWHSSGDFIVTGSSNAIRVWNVKTGHAVNR
LSLGRADSFKETLVWCVCITDDFVIISGDSRGMTSFWNGKLGTLIDEVNAHKADVLCLCL
SEDQKTLYSAGVDPVIVLFARVTAGVRNQWIRSVQRAIHTHDVRSLALAGSKLISGGVDA
YLCISSYPPKALNRYPPLPQAPCVQMAQGKRQLLLRYPTSLDVWQLGAAAPSVYQLSANT
FLKLSQEPARLLQLKAKDDEWIVCATVSPGGDYVAYATESNVYIYHFIQSAGTLQLKKLV
PPEDVGTCHRMMFIHHPTEPDLSARLLLATPKLTLQLVDVGSSGSMKVVHTFSRESGQFT
MGDCIHLMDCSADGRLAAVADHTSNIVILDLKSYKVHATLPRYKSHPTALAFHPSSHLLV
VSYADHKIVEYDVIRRQYTPFSKKLSEKLPVQWLSRSCAVRHITFDVRHPDVIILHDDSV
IYTIDKNKEFSEPDAKITKFDTGTEDSLDAPPAPLKAPSAQQQKLNSTAAGSGPSSSCFG
MSKKYKHLAYFGALDVGGELVAVEVSPLALEKHLPPALYKKRFGV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaacctcttcaaaattcacagtaccagattctacgatgtagaaccaaaagcc
atacacagcatggcttacgagtctaaccggctagctctttccaggtcagacaacagtata
gaaatatggaatttggaacattctcctcacattgaaaagttgattcccggttccccagaa
ggctcaattgaagcgctagtttggtcaaaaggcaggctcttttccactggcttgcatggt
tttgtggtcgagtatgacttggttgctctttcgcccaaagccagttacgctgtcacatca
ggatctgcatggtgtcttgcagtcaacaaggcacacactcacttggcggctggctctgaa
gaaggatacgtctgcttgtttgaaatctttgaagaaggattgatgtactataaagttttc
gacaaacaagaaggtcgtattctctctctgtcctggcacagctcaggcgactttatcgtc
acaggatcatccaacgcgataagagtatggaacgtgaaaactggtcacgccgtcaatcgt
ctatctctcggccgagccgacagtttcaaagaaactctcgtctggtgtgtctgcatcaca
gacgactttgtcatcatcagtggcgactctagaggcatgacatcgttttggaacggtaaa
ttgggcactctgattgacgaagtgaacgcccacaaagccgacgtactctgcctgtgtcta
tctgaagatcaaaagactctctactcggctggagtcgatccggtcatagtgctctttgct
cgtgtcacagccggagtccggaatcagtggattcgatctgtccagcgtgccatccacacc
cacgacgtgcgcagtctggccctggccggttccaaattaatatccggaggcgtggatgcc
tatttgtgcatctcatcatatcctccaaaggcgttaaatagatacccacccttacctcag
gcgccgtgcgtgcagatggctcaaggcaagcgacagctgctgctgcgttacccgacgtcg
ctggatgtgtggcagctgggcgcggccgccccgagcgtttaccagctcagcgccaatact
tttttgaaactatcccaagagccggcccgtctcttgcagctgaaggctaaagatgacgaa
tggattgtctgcgctaccgtgtcacccggtggcgattacgtggcctacgccaccgagtcc
aacgtctacatttatcatttcattcagtcggctggaacattgcaacttaaaaagttggta
ccgccggaagacgtcggcacctgccaccggatgatgttcatccatcacccgacagagccc
gacctctctgcccgtctcttgttggccacgccgaaattgacgctccagttggttgacgtt
ggcagctcgggatcgatgaaagtggttcacacgttcagccgcgagagcggccaattcacg
atgggcgactgcatccatttgatggactgctcggccgacggtcgactggccgccgtggcc
gatcacacgagcaacatcgtcatcctggacctgaaatcctacaaagttcacgccactctg
ccgcgctacaagagtcacccgacggcgctggccttccatccgtcgtcgcatctcctggtg
gtgtcgtacgccgatcacaagatcgtcgagtacgacgtcatccgtcgtcagtacacgccc
ttctccaagaagctctcggagaagctgcccgtccagtggctgagtcgatcctgcgccgtc
cggcacatcacgttcgacgtccgccacccggacgtgatcatcctgcacgacgacagcgtc
atctacacgatcgacaagaacaaggaattttctgagccggatgccaagattaccaaattc
gatacgggaacggaggacagcctggacgctccacccgccccgctcaaggcgccctcagcc
cagcaacagaaactgaactcgacggcggccggcagtggaccgtcgtcttcttgctttggc
atgtcgaagaaatacaaacacctggcctactttggtgcccttgacgttggcggcgaactg
gtggccgtcgaagtcagtcctttggcgctggagaaacacttgcctccggccttgtacaag
aaacgattcggagtttga
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