Daphnia pulicaria: 124312934
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Entry
124312934 CDS
T08670
Name
(RefSeq) uncharacterized protein K02A2.6-like
Organism
dpz
Daphnia pulicaria
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RT_RNaseH_2
RT_RNaseH
Integrase_H2C2
RVT_1
rve
zf-H2C2
API5
Motif
Other DBs
NCBI-GeneID:
124312934
NCBI-ProteinID:
XP_046633486
EnsemblRapid:
LOC124312934
LinkDB
All DBs
Position
1:523071..527942
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AA seq
1487 aa
AA seq
DB search
MATAADAMDAATAAAAAATAANSRMDAMEQNQLTMTTQLAGIAQQLQALLGGAGSSGGAG
GGGSSGGGGGSSGGAGGGGSSGGAGGGGGGAGGGGGSAGIVPPPAPMITPQRRRIDPSCL
DKLPGDASLSQLRAWTNRWNDFSQLNQLSAYPINEQMAAFRMVLDPAMHQVVEVALGISP
TSMATPADVLGQIRDYIRSKRNIALDRVAFEECKQGTTETFDEFYIRLKNLAEAANLCIA
CVDERMATRIMAGIRDAETKRRLLAISPFPTAQQTINICRSEESARANEKSLNSPVSVAK
IQLKHQRQFRQSEANKCRSCGRPAHHSDEQCPAIGRQCHSCGQENHFAPCCPTRSRSGAG
HQAGGSGSSGGAGGSGSSGGAGGSGSSGGAGGSGSSGGASNRARINMKRVVVGNVSTSRR
RQPAPTIPMQICGPTGNVIATIPEATPDSGAEATVAGMEVLRQLGLSEQDLSHCPFELVM
ADKSTPLLAVGEKEFCVKYEGGTATITILFSPDVEGLLVAWHDCKALGILHEDYPKPIRK
PATGPIPSHPTVDDVKRIEEAIADGYADVFDQSGILKCMEGPEMTIELKDDAEPYHVNGA
RPIPFADRPEVKRLLDEYVAKGIITPVTEASEWAAPLVVTRKADGSLRLCIDHTKLNRHV
RRPTHPTRTPRDAVAEIAGDAKFFTSFDAANGYFQIPLHPSSQHLTIFMTPWGRYKFLRA
SMGLCSSSDEYNRRADVAFQGVPHTVRVVDDLLRFDSAFPEHVAGVCAVLSAARKAGITF
SRKKFCFAQQQIQWVGYQIQPGGVTVDPVEQLAGFSTSVAAAKAPLRPLLSVRTPFEWTA
DHDTAFSAVKQALLAPPVLAQFDPSLETSLQVDASRKHGMGYALLQLHGSTWKLVDANSR
WCTDTESRYAIVELELAAVEWAMRKCKLYLLGLPMFRLIVDHQALVTILDKYTLDAVENP
KLQRLKERLSPFVFTTEWRKGRDHAIPDALSRAPVHDPGPDDEAVNTDVQSFAQRIIVRQ
VNIMQREDEELEPVEDPPHLPDPLLEDLRAVASTDADYSALITAISHGFTTNRERTAQCV
RQYWNIRTELSVEDGLVLFGRRIVIPKPARRDLLRKLHSAHQGIVRMKRRARQTVFWPGI
SNDITMLVESCGSCQQRLPAQQQEPLMRDPLPSRVFEDVSVDLFQSGSLHFLVYADRLSG
WPIVHQWRHDPSAREVTQAIVENFVDLGVPVRLRSDNGPQFDSNLFQTKLRQWGVQWGNS
TPEYPQSNGHAEAAVAAMKELVTKISPNGDISSDEFSRGMLEFRNTPRENGVSPAEMVFG
HPLRSIIPAHRSSYAARWRTVMEGRDRQAEIDAGVKFRYDEHARPLAPLPLGTHVRIWNP
KSKLWDKMGVIVSVGRYRSYRVKFASGSVLWRNRRFLRPMIAATPADEDGTDDGGNRGTD
ASTADPDGKESDSVSIDHSRPGEITDSGQPAPRRSGRIPKRRVMFDI
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggctacggcggctgacgcaatggacgccgcgaccgctgcagcagcagctgcaacggcc
gcaaattcccgcatggacgccatggagcaaaatcaactcacgatgaccacccagctggct
ggcatcgctcaacagctccaggcgttgctcggcggcgccggcagcagcggtggcgctggc
ggaggtggcagcagcggtggcggaggcggcagcagcggtggcgctggcggaggcggcagc
agcggtggcgctggtggaggcggcggtggcgctggcggaggcggtggcagcgcgggtatc
gtcccgcccccagcccctatgatcacgcctcagcgacgccgtatcgacccgtcctgtctg
gacaaattgcctggcgacgcgtcgctctcccagcttcgtgcttggacaaatcgatggaac
gatttcagccaattgaaccagctcagcgcgtatccgatcaacgagcagatggccgccttt
cggatggtcctggaccctgctatgcaccaggtcgtcgaggtggcgctcggcatatctccg
acgtcaatggcgaccccggccgacgtcctcggccagataagggactacatccggtcaaaa
cgcaacatagctttggacagagtcgcctttgaagaatgcaaacaaggtacgacggaaact
tttgatgaattttatattcggctcaagaacctcgcggaagctgccaacctctgtatcgcc
tgcgtggacgaaagaatggcgacgcgcataatggcaggcatccgtgacgcggaaacaaag
cgacgtctgttggccatcagtccgttccccacggcccagcagaccatcaacatatgccgt
agtgaggagtcggcacgggcaaacgagaaatctttgaatagcccagtgtcagtagccaaa
atacaactcaagcaccagcggcagttccggcagtcagaagccaacaagtgtcgatcgtgc
ggccgcccggcccatcattcggatgaacagtgcccggcaatcgggaggcagtgtcatagt
tgcggacaggagaaccatttcgccccatgctgcccaacgaggtcaagatcgggcgctggt
caccaggctggcggaagcggcagcagcggtggcgctggcggaagtggcagcagcggtggc
gctggcggaagtggcagcagcggtggcgctggcggaagtggcagcagcggtggcgctagt
aatcgtgcccgcatcaacatgaagcgcgtggtggtcggcaacgtgagcacatcccgacga
cggcaaccggcacccaccattccaatgcaaatttgcggcccaaccggaaatgtgatagca
accataccggaggcgacgccagatagtggagcagaagctaccgttgccggcatggaggtg
ctgcgccagttggggctatcggagcaggacctctcgcactgcccgttcgagcttgtgatg
gcggacaaatcgactcctctcctcgcagtgggagagaaggaattttgcgtcaagtacgaa
ggagggacggcaaccataaccattctattcagcccagacgtagagggactcctcgtcgcc
tggcatgattgcaaggctctaggaatccttcatgaagactaccccaaaccaatccggaag
ccagctacgggccctatcccgtcgcaccccaccgtggacgatgtcaagcggatcgaggag
gccattgcagacggttatgccgatgtgttcgaccaatcgggtattctaaagtgcatggaa
ggcccggaaatgacaatcgagctcaaggatgatgccgagccataccatgtcaacggggcc
cgaccaatacccttcgccgatcggccggaagtaaaacgcttgctggatgaatacgtggct
aaaggtattattacccccgtaacggaggcctcagaatgggcagcccccttagtagtcact
cgtaaagcggacgggtccttgcgcttatgcatagatcacaccaagctgaatcgccatgtc
cgccggccgacacatccaacccgcactccgcgggacgccgtcgctgaaatcgctggagac
gccaaattttttacatccttcgatgcagccaatgggtattttcaaattcccctccacccg
tcgtcgcaacatctaaccatattcatgacgccgtggggcaggtataaattcctcagggca
tccatggggctttgcagctccagtgatgaatataaccggcgcgccgacgtcgccttccag
ggcgtcccccataccgtcagggtcgtcgacgaccttctccgctttgactccgcgtttccg
gaacacgtcgccggagtctgtgccgtcttgtcagccgctaggaaggccggcatcaccttc
agccggaaaaaattctgcttcgcccagcaacagatccagtgggttggataccaaatacag
ccaggtggcgtcacggtcgaccctgttgagcagctcgccggattttctacgtcagttgcc
gcagccaaggcgcctctccgccccctgttgagtgtcagaacaccttttgaatggaccgct
gaccacgacacagccttttccgccgtcaagcaggcgctgttagcgccgcccgtcctggca
cagtttgatccatcgctggaaacgtccctccaggtggatgcatcgcggaaacacggcatg
ggatatgccctcctgcagctacacgggtctacatggaaactggtcgacgccaactccaga
tggtgtaccgacacagagtcccgctacgccattgtggagctggaactggccgccgtcgag
tgggccatgaggaaatgcaaactatacctactcggcctgcctatgtttcgcctgatcgtc
gatcatcaggcccttgtcaccatcctagacaagtataccctagatgctgtggaaaacccg
aagctgcagcgcctaaaggaacgcctttcgcccttcgtgttcacgacggagtggcgcaag
ggccgcgatcatgccattccagacgcgctatcccgtgcgcccgtgcacgatcccggtcca
gacgacgaagccgtcaacaccgacgtccagtcattcgcgcaaaggataatcgtacgtcaa
gtcaacattatgcagcgggaggacgaagagctagagcccgttgaggaccccccgcattta
ccagatcctttactggaggacctcagggctgtagcctcaacagacgccgattactcagcg
cttattaccgcgatctcgcacggtttcaccaccaacagggagcgcacagcccaatgcgtt
cggcaatattggaacatccggacggaactgtccgtggaggatggcctcgtcttgttcggt
cgacggattgtcatccccaaaccagcccgccgcgacttactacggaaattgcattcagct
catcaagggatagtgcgcatgaagcggcgcgcccgacaaactgtattctggcccgggatc
tcaaacgacataaccatgttagtggagagttgtggttcatgccaacagcgactcccagct
caacaacaggagcctctgatgcgtgatcccctgccctctcgtgttttcgaagatgtctcg
gtcgaccttttccagtctggttcgcttcattttctcgtctatgccgaccgcctatctgga
tggccaatcgtgcaccagtggcgccacgacccgtccgctcgcgaagtgacccaggcgata
gtcgagaacttcgtggatctcggtgtcccggtccgcctgcggtcagataacggcccacaa
tttgactctaatctcttccagacgaagctacggcagtggggcgttcaatggggaaattcg
acgcccgaatatccacaaagcaacggacacgcggaggcggcggttgccgccatgaaagag
ctcgtgacaaaaatttcgcctaacggcgatatctcttccgacgaattttctcgcgggatg
ctggaattcaggaataccccaagggagaacggtgtgtcgccagcagaaatggtttttggc
cacccgctgcggtccatcattccggctcaccggtcgtcgtacgccgcacgctggaggact
gtcatggaaggaagggaccgccaggcagaaatcgacgccggggtcaagttccggtacgac
gaacacgcacggcctctggccccacttcctttggggacccacgtacggatttggaacccc
aaatccaagttatgggacaagatgggagtcattgtcagtgtcgggcgctatcgctcctac
cgcgtcaaattcgcaagcgggagcgtcttatggcgaaaccgccgtttcctacgcccaatg
atcgccgccacgccagccgacgaagacggaaccgacgatggaggaaatcggggtacagac
gccagcaccgcggatcctgatggaaaggagagcgacagcgtatccatcgaccacagccgt
cccggggaaatcaccgacagcggccagcccgcgcctcggcgaagcggccggattccaaag
cgccgagtcatgttcgatatctag
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