Daphnia pulicaria: 124314627
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Entry
124314627 CDS
T08670
Name
(RefSeq) integrin alpha-PS2-like isoform X1
Organism
dpz
Daphnia pulicaria
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
124314627
NCBI-ProteinID:
XP_046635813
EnsemblRapid:
LOC124314627
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Position
10:complement(5491105..5507710)
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AA seq
1235 aa
AA seq
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MTTPLMVLSLLLAVEVLAFNVDIPSALTHRGPSGSYFGFSVDLHKDRGLNWLLVGAPTAQ
TEQPGVTRGGSVFRCSTEIPDQCQSIPFDVTGNNNASGQQIDQKSDQWFGATVRSAGPNG
PVLACAPRYVWFSNNYKRREPVGTCFVARESFREFSEYSPCRTSNWGYHRQGSCQAGLGA
TITPDGLRVFIGAVGSWYWQGQLYSINTTNPAVRSPVFRTFVTGQLFSQGLFSRLDVLST
TEGSAAEDDSYLGYSSAVGDLDDDGRSDVAVGMPRGANLTGKVVLLTSNLTNIVNITGQQ
LGAYFGYCVTVTDVNNDGLQDVIVGAPLYSNYANTEGKYEMGRVHVYYQSARLRQSFRRS
DVLDGGEVSKARFGLAVSALGDINLDGFNDIAVGAPYDGPSERGAVYIYHGSSKGIRTKA
SQVIYAEEVSSELSTFGFSLAGGMDVDGNEYPDVLVGAYDSDRIVYLRSRPVVYLNTVDI
NYDVESKQIDLENKNCSLFDGTAVACVPLTLCFEYSGRGVNNREEVMVQLILDSKSPKNP
RLHFLSEENKSSLNETYQLAKGQRACRTYTVYVRPLIRDKLTPIESEVRYSLREVTDTRR
GGAVQAGRSRRSLPPVLGAEAPSKTDVIVIQKNCGPDNICVPDMQVTYKANMDKYIFGSD
KKLEIEVSVLNAAEDAFEAAVYLTLPEEVKFVRVDRVDDKEGGPAVLCSSPSTDELGQPV
LRCEIGNPLAAFRTSVFTIVLQPSARLARENAAAAIAAGLKAKSSLDFVLEVNSTNPEDA
SQMFDNRAEISLPIRVETDLSIRGISDPEVVRFNLSSFVSSTVQVKSHENQVGPQVLHIY
ELGNRGPSDILKADVYILWPTKTLSGKDLLYLVDRPFVDGPANCQLMEQFNPLALKLESE
RLSSSSSSASFSGQRSASSASSGSSSSSSSYSSSSSSGSSSSGGSSASKSSKTTYSSSSS
SGGGGGGANAISSSSSSSTTSVDGKPKTTSTSSSSWNRTSTVTRYNPDGTVQSSVTSQNS
GAGAPGQVIPGQIFDEEEDYDYDEELDQQSTQGRRRRRQASMNFQHGRNTKNRVRSRRQS
QSKDLDRELNCGATQCTVIKCSAGPITSNNNVVFKLRARIWAQTISEIDWEDLVISSKMV
VDINELPYGVDPGYLPLRSATVTTTLDQLDREREAKAIPWWIIVLAAVAGVLLLLLLIFV
LWKLGFFERSRPDKDECEQEPLKSENGHLQRDEAL
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccattgatggttttatcgcttttattggcggttgaagtattggcgttcaac
gtggacatccccagcgccttgacgcatcggggacccagcggatcctatttcggattcagt
gtcgacctccacaaggatcgaggactcaactggttgttggttggagctccgacagcgcag
acggaacaaccgggcgtcacccgaggtggatccgttttccgttgcagcacagaaattccc
gaccagtgccaatcgattccattcgacgtcacaggaaacaataacgcgtcgggacaacaa
atcgaccagaaatcggaccagtggtttggcgctaccgtccgcagtgccggacccaacgga
ccagttctggcctgcgctccccgttacgtctggttctccaacaattacaagcgccgtgaa
ccagttggcacttgcttcgttgcccgtgaatcatttcgggaattctccgaatattcgcca
tgcaggacctccaattggggataccatcgtcagggttcgtgtcaagccggactgggagcc
actatcacaccggatgggcttcgagtgtttatcggcgccgttggcagttggtactggcag
ggtcagctgtattcgatcaataccacaaatccggccgtcagatcgcctgtctttcggacg
tttgtcacaggtcaactcttctcccagggccttttctcacgactggacgtcctctccacc
actgaaggatctgctgccgaggacgacagttacctcggctattcctctgcagttggcgat
ttagatgatgacggccgatcagacgtggccgtcggaatgccccgcggtgccaatctcact
ggaaaggtcgtgttgttgacttcgaatttgaccaacattgtcaacatcactggccagcaa
ctgggcgcttatttcggctattgcgtgaccgtgacggacgtcaacaacgacggactccag
gacgtgattgtcggcgccccgctctattcgaattacgccaacacggaggggaaatacgag
atgggccgagttcacgtttattaccagagcgcccggctccgccaatcgttccgtcgcagt
gacgttctcgacggcggcgaagtctccaaggctcgattcggcttggccgtttcagccctg
ggcgacatcaacctggacggattcaacgacatcgccgtcggggccccttacgacggaccc
agtgagagaggagccgtttacatttaccacggatccagcaaaggcatccgcaccaaagcc
tcgcaggtcatttacgccgaggaagtctcgtcggaattgagcacctttgggttctcactg
gccggcggcatggacgtggacggcaatgagtatccggacgttttggtcggcgcttacgat
tccgaccggatcgtctacctccgctcccgccccgtcgtctacctcaacacggtcgacatc
aactacgacgtcgagtcgaaacagatcgacctggagaacaaaaactgttcccttttcgac
ggaacggccgtcgcctgcgtccccttgacgctctgcttcgagtacagcggacggggagtc
aacaaccgtgaggaagtgatggtccagctcatcctcgactctaaaagccccaagaatcct
cggctgcacttcctatcagaggagaacaagtcgtcgttgaacgaaacttaccaactggcc
aaaggccagcgagcctgccggacgtacacggtttacgtccggccgttgatccgcgacaaa
ttgacgcccatcgagtctgaggttcgttacagtttgagggaagtgacggacaccaggaga
ggcggagcagttcaagccggacgatcaagaagatctttgcctcccgttctcggtgcggaa
gcgccgtccaaaacggacgtcatcgtcatccagaagaactgcggaccggacaacatttgc
gtgccggacatgcaggtcacttacaaggccaacatggacaagtacattttcggatcggat
aagaaattggagattgaagtgtcggtgctgaacgcggccgaagatgctttcgaggccgcc
gtttatttgacgctgccggaagaagtgaaattcgttcgagtcgatcgcgtcgacgacaag
gaaggcggaccggccgttttgtgctcgtcgccttcgacggatgagttgggtcaaccggtt
ttgcgctgcgaaatcggcaacccgttggccgccttccgcacttccgttttcaccatcgtc
cttcagcccagcgccaggctggcccgtgagaacgctgctgcagccatcgctgccggactc
aaagccaaatcgtctctcgatttcgtcctggaagtcaacagcaccaatccggaagatgcc
agtcaaatgtttgataatcgagccgagatttcactgcccatccgagtcgaaactgatctg
tccatcagaggaatttctgacccggaagtggttcgtttcaacttgtcctcatttgtcagc
tctacggttcaagtcaagagccacgaaaatcaagtcggaccccaagtgcttcacatttac
gagctgggcaatcgtgggccgtcggacatcctcaaggctgacgtctacatcctctggccc
accaaaacgctttcaggcaaagatttgctctacctggtggaccgtccctttgtcgacgga
cccgccaattgccaactgatggagcagttcaatccattggctctcaaactggaaagcgaa
aggctcagcagctcgtcatccagcgcaagtttcagtggccaaagaagcgcctcttcggca
tcgtctggtagcagttcatcatcatcttcctattcgtccagcagctcatccggcagctca
tcatccggcggaagtagcgccagtaaatcaagcaaaacaacttattcctccagcagttct
tccggtggtggtggcggtggtgccaatgccatttcgtcctcgtcgtcatcctcaacgaca
tctgtcgacgggaaacccaaaacaacttcgacttcttcttcctcctggaaccggacgtcg
acggtaacccgttacaatcccgacggcactgtccagtccagcgtgaccagccaaaacagc
ggagctggagctcccggacaagtgatccctggccaaatctttgacgaagaagaggattac
gattacgatgaagaactggaccaacagtcgacccagggacggaggagaaggcgccaggca
tcgatgaacttccagcacggaaggaacacgaaaaatcgcgttcgcagtcgtcgtcaaagc
cagtcgaaggatctggacagggaattgaactgcggagcgactcagtgcacggtaataaag
tgctcagctggtcccatcacttccaacaacaacgtcgtgttcaaattgcgcgccagaatt
tgggctcaaaccatttcagagattgactgggaggatttggtgatttcatcaaagatggtg
gtggacatcaacgaacttccgtacggtgtcgatcctggctaccttcctctacgttctgct
acggtgacgactacgctggatcaactggatcgggaacgagaagctaaagctattccctgg
tggatcattgttctggcagccgtggccggagtgttgctccttctgctcctcatctttgtc
ctttggaagttgggcttcttcgaacggagtcgaccggataaggacgaatgcgagcaggag
ccgctcaagtcggagaacggccatttacagagggacgaagccctttaa
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