Daphnia pulicaria: 124334396
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Entry
124334396 CDS
T08670
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
dpz
Daphnia pulicaria
Pathway
dpz04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124334396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpz04040
]
124334396
Ion channels [BR:
dpz04040
]
Ligand-gated channels
GABA-A
124334396
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
124334396
NCBI-ProteinID:
XP_046645004
EnsemblRapid:
LOC124334396
LinkDB
All DBs
Position
1:13199039..13203950
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AA seq
541 aa
AA seq
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MKFSDTLLFYSFFVFQRIGGEVSSSRTRLKNVTHVLGQLLDDYDIRLRPDFGGDPLYVGM
DITIASFDAISEVNMDYTLTLCLNQYWRDERLAFTHEKEDVVLTLSGDFSNKIWVPDTFF
ANDKNSFLHDVTERNTLMRLHGDGSIEYGLRFTTTLACMMDLHYYPLDHQNCTVEIESYG
YTVSDVVMFWRETPVVGVEDAELPQFTIVGYETNDRMEKLATGAYQRLSLSFRLQRNIGY
FIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKA
IDVYLVMCFVFVFAALLEYAAVNYTFWGARAKKKKKKGVSRQTLEDDHIRNSLRDLDGQE
EDSCDDGIIQLHDLRMSPIPSLRNRHQAGGGTTAAGRSSAAAPAPAGHKVIGPPSLRFVR
RGHLSNQHHHHHHHHHHSCSQPKHFWSNSKPQSSGRCCRKSSANASVANRPANFNHHAGH
SNRSDNKRSASQSANGSRLLCGKYSLPKIKDVNLIDKYSRIVFPAAFAIFNVVYWSIYIL
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttagtgacactttactcttctactcttttttcgtctttcaaaggattggcggt
gaggtgtcgtcatcgagaactcgtctcaaaaatgtcacccatgtcctcggtcaattgctg
gacgattacgacatccgtctgcgcccagactttggaggtgatccgctctacgtcggcatg
gatatcaccatagcatcgttcgacgcaatttctgaagtcaatatggattacacgttaaca
ttgtgcctcaatcaatattggagagacgagcggctggcttttacacacgaaaaagaagac
gtcgtcctcacactcagtggcgacttcagtaacaagatttgggtgccggatacttttttc
gccaacgacaaaaacagttttctgcatgatgtcacggagaggaacactctgatgcggctg
cacggagacggcagcatcgagtacggacttcgattcaccaccactttggcgtgcatgatg
gatttgcattattatccactcgaccatcagaactgcaccgtcgaaatcgaaagctatggg
tacacggtttcggacgtggtcatgttctggcgtgagacgcccgtcgtgggcgtcgaagac
gctgaattaccccaatttacgatcgtcggctacgagaccaacgaccgaatggagaagttg
gccacgggcgcctatcagcgcctatccttgtccttccggctccagcgcaacattggctat
ttcatattccaaacgtatttgccgtcgatcctcatcgttatgctgtcgtgggtctccttt
tggatcaatcacgaagccaccagcgcccgtgtcgctttaggaatcacgaccgtgttgacc
atgacgaccatatcgacgggcgttcgatcttccctgccgcgcatcagttacgtcaaagcc
atcgacgtctatctggtcatgtgcttcgtctttgtctttgctgccctgctcgaatacgcc
gccgtcaattacactttctggggcgccagggccaagaaaaagaagaagaagggcgtcagc
cggcagacccttgaagacgaccacattaggaattcgctgcgggatttggacggccaggag
gaggacagctgtgacgacggcatcattcagttgcacgacctgagaatgtcacccattccg
tcacttcgcaatcgacatcaggccggcggcggaacaacggcagctgggcggagcagcgct
gctgctcctgctcccgctggccataaagtcatcggcccgcccagtttgcgcttcgtccgt
cgtggtcacctgtccaaccaacatcaccaccaccaccaccatcaccaccattcgtgttct
caaccgaaacacttttggtcaaattccaaaccgcaatcatcgggacgctgttgtcgtaaa
tcctctgccaacgcgtccgtggccaacaggccggccaatttcaatcatcacgccggacat
tccaatagaagcgacaacaaaagaagcgcttcgcagtcagccaacggcagtcgcctactt
tgcggaaaatattccctaccaaagatcaaagacgttaatctcatcgacaaatattcacga
atcgttttcccggctgcattcgccatcttcaacgtcgtctactggagtatctacatactc
ctttaa
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