Daphnia pulicaria: 124341267
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Entry
124341267 CDS
T08670
Name
(RefSeq) serine/arginine-rich splicing factor 1-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124341267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpz03041
]
124341267
Spliceosome [BR:
dpz03041
]
Common components
Common spliceosomal components
SR proteins
124341267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
124341267
NCBI-ProteinID:
XP_046650248
EnsemblRapid:
LOC124341267
LinkDB
All DBs
Position
5:5918469..5920279
Genome browser
AA seq
262 aa
AA seq
DB search
MSSSRNNEARIYVGNLPPDIRTKDIEDLFYKFGKIAYIDLKNRRGPPFAFVEFEDPRDAE
DAVHARDGYDYDGYRLRVEFPRGSQNSGGGHRGSGGRSGGRGGDGGRGGGDGGGSNGGGR
SRGPPARRTNYRVIVTGLPPTGSWQDLKDHMREAGDVCYADTYKDGTGMVEFLRYEDMKY
AIKKLDDSRFRSHEGEVSYVRVKEDSGDGRSGGTRDRSRSYSPAGGGGKTRGSRGSPSYS
PVRRGGSYSRSRSRSPRSRSRS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttctcgcaacaatgaagccagaatctacgtcggtaacttgccacccgacatt
cgtaccaaggacattgaagacttattctacaaatttggaaagattgcatacattgattta
aagaaccgacgaggacctccttttgcttttgttgaatttgaagatcccagggatgctgag
gatgctgtgcatgctcgtgatggctatgactatgatggatatcgtttgagagtggaattt
ccaagaggatcacagaattctggtggtggacacaggggtagtggtggtcgaagtggagga
agaggtggtgatggaggtagaggtgggggtgatggtggtggtagcaatggtggaggcagg
agtcgagggccaccagcaagaagaacaaattacagagtcattgtaactggtctccctcct
actggatcatggcaagatttgaaagatcacatgagagaagctggtgatgtgtgttatgct
gatacctataaagatggaactggaatggttgaattccttcgctacgaggatatgaaatac
gccatcaagaaattagatgactcaagattccgatcacatgagggagaagtatcatatgtg
cgcgttaaggaagatagcggagacggtcgcagcggcggaactcgtgatcgatcgcgatct
tattctccagccggtggtggcggcaaaacacgtggaagtcgcggctcccccagctattcc
cccgttcgtcgtggtggttcatattcccgttcacgctcacgctcacctcgttccagatca
cgatcttaa
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