Daphnia pulicaria: 124348881
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Entry
124348881 CDS
T08670
Name
(RefSeq) probable nuclear hormone receptor HR3 isoform X1
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124348881
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
dpz03310
]
124348881
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124348881
Nuclear receptors [BR:
dpz03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
124348881
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124348881
NCBI-ProteinID:
XP_046655207
EnsemblRapid:
LOC124348881
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Position
7:16877162..16891694
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AA seq
784 aa
AA seq
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MMEAPAVPGANPHHSMDILDEIFGSEWSAGQQQAADSQQQQQQQRLLVGGVDTRTELVVR
RKGGGGGESGGQPPPGVPPPLQSIHQHHHHQQQQQQHPPTCLTPGPTLSQHSTTVESCFS
PAAPSSQETSSVVDDNDNEAQDISEHEHNNHNNLQSKAGSDFAADTTTPPPRRNSNNSIR
AQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCVVDRVNRNRC
QYCRLQKCLALGMSRDAVKFGRMSKKQREKVEDEVRYHRAQMKAQQAETSPDSSVFDNQQ
PSSSDQLAPYTGGYSSYGGDMSPYTPSGYGFTPTPHTNQGTVPGGGSGGGGAGGGNGGGS
SMSSGGYDISGTTDYVDSTTFDPRQTPIEPLPDSNLVSPVVSTGSSAKMMMPDYPGGVTH
FLAKNPRPGPDPGGGRNGGASNSGPSVVLSGGGGGVGGGCNTSLGQVHLNDRSSSAACQQ
QQQQHQTSYPRPPPLPPSATGALMVTAGSSNNGSKVATTSTPDVDDEEYFEPNPVQISEL
LAKTIGDAHSRTCLFSGEHIADMLRKPQDISKVHYYKNMAQEELWLECAQRLTAVIQQII
EFAKMVPGFMKLSQDDQIVLLKTGSFELAVLRMSRYYDLSQNAVLFGDTLLPVEAFLTPD
SVEAKLVSAVFEFAKSLAELKLSEIQLALYSAFVLLSSDRMGLRGTLEIQRLGQAVLRAL
RLELSRTHRTPLKGDISVADSLAARLPALREISGLHMEALARFKRATPHLEFPALHKELF
SVDS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagctccggccgttccgggtgccaatccgcatcattcgatggatattctcgat
gagatttttggcagtgaatggtcggctggccaacaacaggcagccgacagtcaacagcaa
caacaacaacaacgattattagttggtggtgtcgatacacggaccgaattggtggtgcgc
cgtaaaggtggtggtggtggtgaatcaggaggtcaacctcctcccggtgtgcctccgcct
ctccaatcgatccaccaacaccaccaccaccagcaacaacaacaacaacatccgccaacg
tgcctgactcccggcccgacgttgagccaacattcgacgacggtcgagtcttgtttctca
ccggccgctcccagcagccaagagacgagcagcgtcgtcgacgacaacgacaacgaagcc
caagacattagcgagcacgaacacaacaaccacaacaacctccaaagcaaagccggatcc
gattttgccgccgatacaacaacaccgccgcccagaagaaatagtaacaattccatcaga
gcgcaaattgagatcatcccgtgcaaggtgtgcggcgacaagagttcgggcgtccattat
ggagtcatcacctgcgagggctgcaagggtttcttccggcggtcgcaaagttccgtcgtc
aactaccaatgcccgagacaaaagaattgcgtcgtcgatcgcgtcaaccgcaaccgatgc
caatattgccgcctacagaaatgcctggcactcggcatgtccagagatgcggtgaaattc
ggtcggatgtcgaagaagcagcgggaaaaggtggaggatgaagtgcgttaccatcgggcg
caaatgaaagcccagcaagcggaaacgtcgcccgatagtagcgtctttgacaaccaacag
ccgtcgtcgtccgaccaactggcgccctacaccggcgggtattccagttatggcggtgac
atgagcccctacacgccgtccggttacggattcacgccgacgccacacacgaatcaaggc
accgtgcccggtggcggaagcggcggcggaggtgccggcggaggaaacggcggaggaagc
agcatgagtagtggaggttacgatattagcggcacgacggattatgtggatagcacaacc
ttcgaccctcgacagacgcccatcgaaccgttgccggacagcaatttggtttcgcctgtc
gtttccaccggctcttccgcaaaaatgatgatgcccgactatccgggcggagtgacgcac
tttctggccaagaatccacggcctggtcccgatcccggtggaggtcgcaacggtggtgct
agcaacagcggaccttcggtcgtcctcagtggtggtggtggtggtgttggtggtggttgt
aacactagtctcggtcaagttcatctgaacgaccggtcatcatctgctgcttgtcaacaa
caacaacaacaacaccaaacttcttacccaaggcctcctcctcttcctccttctgctact
ggcgcactgatggtgacggctgggagcagtaacaatggcagcaaggttgcgaccacttcg
acgcctgacgtcgatgacgaagagtactttgaaccgaatcccgttcagatctcagaactg
ttggccaagaccatcggcgacgctcacagccggacgtgtctcttcagcggggagcacatc
gccgacatgttgcgcaaaccgcaggatatttctaaagtgcattattacaaaaacatggca
caagaggagctctggttagagtgcgcccaaagattgacggctgttattcagcaaattatc
gaatttgccaaaatggttcccggattcatgaaactttctcaggatgatcagattgttctt
ctgaaaacagggagctttgagctggccgttttgcggatgagtcgctactacgacctgagc
cagaacgcggtgctgttcggcgacacgctcctgccggttgaggcttttctaacgccggat
tcagttgaggccaaattggtttcggctgtttttgaatttgccaaaagcctggccgaactg
aagctcagtgagatccagttggcgctctactctgccttcgtcctcctctcaagtgatcga
atgggactaaggggtacactggaaatccagcggcttggccaagccgttttacgggcgttg
cgtctcgaactctctcgtacgcatcgaactcctttgaaaggcgacatctccgtggccgat
tctctggccgccagacttccggcccttagggaaatctccggacttcacatggaggcgttg
gccaggttcaaacgagccacgcctcatctggaattcccagccctgcacaaggaactcttt
tccgtggatagttag
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