KEGG   Deinococcus radiophilus: LMT64_00945
Entry
LMT64_00945       CDS       T07688                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
drd  Deinococcus radiophilus
Pathway
drd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:drd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LMT64_00945 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:drd03019]
    LMT64_00945 (rny)
Messenger RNA biogenesis [BR:drd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LMT64_00945 (rny)
SSDB
Motif
Pfam: HD RNase_Y_N KH_1 HDOD ATP-synt_B KhpA-B_KH KH_2
Other DBs
NCBI-ProteinID: UFA50517
LinkDB
Position
165606..167423
AA seq 605 aa
MTALYVILALLGIAVAFVMGRALGRQQREVAEQQHEQIARERAEEIRREATAQADALREQ
AQADSDALRIREQQDASSRAEQMLQQAEQKIEEQRQHLAEQLREQRAQLEDRRSQLSEQL
LQFQELRDTLAADRAALDQDRAELTQERTELKAEMAEERERLAADRQEYRSERDAMNREL
ERQSRRAEQLDARGERLDALEERLEGQRRDLAGQEDELQLRSAEIATRLEEVAGLTREDA
RERLLGDLDAELEDEKAARIRAAADQSQKEIQRQARSVIAQAIQRSAAETSAQLSVSVVP
IPSDAMKGRLIGREGRNIRAFEALTGVDLIIDDTPEAVMLSSFNPVRREVAQHVLESLLE
DGRIHPTRIEEMVGRAQEDMRAFIHTQGEEAAIEAGVLGLKPGLLQLLGRMYFRSSYGQN
VLKHSVQVAHLTGIMADELGLDAALARRCGLIHDIGKSIDREIEGTHIEIGVSLGTRFGE
PAEVIDAIAHHHDPENGATLYSVLVAAADAISAARPGARREELEAYTRRLEQLEEIAVSF
PGVQQAYAIQAGREVRVIVQPDQVTDAQATLLARDVAGRIEQDMEYPGQVQVTVIRESRA
TEMAR
NT seq 1818 nt   +upstreamnt  +downstreamnt
ttgaccgccctttatgtcattttggctctgttgggaatcgccgtggcctttgtcatgggc
cgggcgctgggccgtcagcagcgcgaggtggctgagcagcagcacgagcaaatcgcccgc
gagcgtgccgaagagattcgccgtgaggccaccgcccaagccgacgccctgcgtgagcag
gcccaggccgattccgacgccctgcgtatacgtgagcagcaagacgcctcatcgcgggcc
gagcagatgctccaacaggccgaacagaaaatagaagagcagcgccagcacttggctgag
cagttacgtgagcagcgtgcccaactggaagaccgccgcagccaactgagtgagcagctg
ctgcagtttcaggagctgcgcgacaccctagcggctgaccgcgccgcactggaccaagac
cgcgccgagctgacccaggagcgcaccgaactgaaagccgaaatggctgaggagcgtgag
cgcctggccgccgaccgccaggagtaccgcagcgaacgtgacgccatgaaccgcgagctg
gagcgccaaagccgccgcgctgagcagctggacgcccgtggtgagcgcctggacgccctg
gaagaaaggctggaggggcagcgccgcgatctggctggtcaggaggacgagttgcaactc
cgcagcgccgaaatcgctactcgcctggaagaagtggcgggcctgacccgtgaggacgcc
cgcgagcggctcttgggtgatctggacgctgaactggaggatgaaaaggccgcccgcatc
cgtgccgctgctgatcaaagccagaaggaaattcagcgccaggcccgcagtgtgatcgca
caggccattcagcgcagcgccgctgagaccagtgcccagctgtcggtcagcgtggtcccg
attcccagcgacgccatgaagggtcgcctgattggccgcgagggccgcaatattcgggct
tttgaggcgttgaccggggtggacctgattatcgacgacacccctgaagcagtgatgttg
agcagtttcaatccggtgcgccgtgaggtggcccagcatgtgctggagtcgctgctggaa
gatggccgcattcaccccacccgcattgaggagatggtgggccgcgctcaggaagacatg
cgggcctttatccatactcagggcgaagaagccgccattgaagctggcgtgctggggctc
aagccggggttgctgcaacttttgggccggatgtatttccgctccagctacgggcagaat
gtcctcaagcactcggtgcaggtggcgcacctgacgggcatcatggctgacgaactgggg
ctggacgccgcgctggcccgccgctgcggactgatccacgacatcggcaagagcattgac
cgcgagattgaaggcacccacattgagatcggggtcagcctgggtacccgcttcggtgaa
ccggcagaggtgattgacgcgattgcccaccaccacgatcctgaaaacggcgcgacgctg
tactcggtgctggtggccgctgccgacgcgatcagtgcggcccgccctggggcgcggcgt
gaggagctggaagcctatacccgacgcctggagcaactggaagaaatcgccgtgagcttt
ccgggcgtgcagcaggcctacgccattcaagcgggccgcgaggtgcgcgtgatcgtgcag
ccagatcaggtgaccgatgctcaggccacgctgctggcccgcgacgtggcggggcgcatc
gagcaggacatggagtaccccggtcaggtccaggtgacggtgatccgcgaaagccgggca
accgaaatggcacggtag

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