Deinococcus radiophilus: LMT64_03815
Help
Entry
LMT64_03815 CDS
T07688
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
drd
Deinococcus radiophilus
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drd03019
]
LMT64_03815 (hrpB)
Enzymes [BR:
drd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LMT64_03815 (hrpB)
Messenger RNA biogenesis [BR:
drd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LMT64_03815 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
DEAD
Helicase_C
HA2_N
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
UFA51035
LinkDB
All DBs
Position
722707..725169
Genome browser
AA seq
820 aa
AA seq
DB search
MTDLPALTALPDLRTTLAAHPLVLLQAPTGAGKSTALPLELLAEPWLAGRKVLLLQPRRV
AVRGVAARLAAQLGQNVGETVGSRVRFESRVSGATQLEVMTEGILTRRLGRDPELSDVGL
VILDEFHERSLNADLALALLREVQGALRDDLRVLIMSATLDADLPARLGAPLVRSEGRTY
PVEVRYAQAEPGGRIGDTVAGAVRRALAEESGDVLAFLPGVAEIRQAQAALSEVDAVVLP
LYGELPPTEQARAVTPDPQGQRRVILATSIAETSLTIEGVRVVVDSGQRRSQAYDPSTGL
TGLRTGRVTRAEAEQRAGRAGRTAPGVVYRLWPERTQALLAADRPPEMLGADLGPLRLEL
AAWGVTDPGSMEWLDAPPSPAWSAAGEVLRGLDALDSGGRVTEAGEALLRFPTHPRLAHL
LAEGRTGLAADVAALLEERGPRLDGADLTERVAALRQARGSGRLGEWAGAERLARQWRRL
LDVPQDDAQPDAEHVGWLVALAYPERVALLRPGERGRYLLAGGQGAELSPDDPLSGQSAL
AVAHLDGVAEGRRGPEGRIFLAAPLARQELEARATWQPRTDWDSRTGRLLAQEEWRVGAL
VLDTRPLREPDPHAAAAAVARAVTREGLHLLTFSPAAQSLRDRVNSLRTWRPDEGWPNLS
DAALLRSTDIWLAPFLAGIRSREALARLDLLPALQAQLPWPLASQLDDLAPTHLTVPSGN
RIRLDYAPDGSPPVLAVKVQELFGLNDTPTVNAGRTAVLLHLLSPARRPVQVTQDLRSFW
QHGYFEVRKDLRGRYPKHPWPDDPASHAPTAKTKRALERG
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctccctgccctcaccgccctgccggatctccgcaccaccctggccgctcat
ccgttggtgctgcttcaggccccgaccggcgcgggcaaatccacggccctaccgctggag
ttgctggctgaaccctggctggcggggcgcaaagtgctgctgcttcagccccggcgggtg
gcggtgcgtggggtagcggcgcggttggcagcacagttggggcagaacgtgggcgagacg
gtgggcagccgggtccgtttcgagtcgcgggtttccggagccacccagctggaggtcatg
accgagggcattctgacccgccgcctggggcgtgacccggagctcagtgacgtgggcctg
gtcattctggacgaatttcacgagcggagcctgaatgctgatctggccctggccctgctg
cgtgaagtgcagggggcgctgcgcgatgacctgcgcgtactgatcatgtcggccacgttg
gacgccgacctgcctgcccgcttgggcgcgccgctggtccgcagcgagggccgcacctat
ccagtcgaggtgcggtatgcccaggccgagccaggcgggcgcatcggggacacggtggcc
ggggcagtgcgccgagcactggccgaggaaagcggtgatgtcctggccttcttaccgggc
gtggccgaaatccgtcaggctcaggcggcgctgagtgaagtggacgctgtagtgttgcca
ctctacggtgagctgccgcctaccgagcaggcccgtgctgtgacgcctgatccgcaggga
cagcggagggttatcctggcaacctctatcgcagaaacgtcgcttaccattgaaggcgta
cgggtggtggtggacagcgggcagcgacgttctcaggcttacgatcccagcacgggcctg
actggcctacgaaccggacgcgtgacccgcgctgaggcagaacagcgggctggacgtgca
ggccgcactgcgcctggcgtggtgtaccggctgtggccggagcggacccaggcgctgctg
gcggctgaccgccctcctgaaatgcttggggctgacctgggcccactgcggctggaactg
gcggcctggggcgtgactgatccgggcagcatggagtggctggacgcgccgccttctccc
gcatggtccgctgccggcgaagtgttgcgcggtctggacgctctggacagtgggggccgt
gtcaccgaggcgggagaggccttgctgcgtttccctacccatccccgtttggcgcacctg
ctggccgaaggccgcaccggattggccgccgatgtggccgcactgctcgaagaacgcggc
ccacgcctggacggggccgatctcactgagcgggtggctgcgctgcgtcaggccagaggg
tctgggcggctaggggaatgggcgggtgccgaacggctggcgcggcaatggcggcgcttg
ttggatgttccgcaggatgatgcccagccggacgctgagcatgtggggtggctggtggcc
ctggcttacccggagcgcgtagctttactgcgccccggcgagcgcggacgttacctgctg
gcgggtgggcagggggccgaactgtcccctgatgatcccttaagtggccagagtgcgctg
gcggtggcccatctggacggcgtagccgaagggcggcgtggtcctgaaggccgcatcttc
ctggccgcgccgctggcccgtcaggagttggaggcgcgggccacctggcagccacgtacc
gattgggacagccgcaccggacgcctgctggcgcaggaggaatggcgcgtgggagcgctg
gtcctggatacccgcccactacgcgaacctgacccgcacgcggctgcggccgccgtggcc
cgcgccgtgacccgcgaggggctccacctgctgaccttttccccggcggcccagagtctg
cgggaccgggtaaactcgctgcggacctggcggcccgatgagggttggcccaacctgagc
gacgcggccctgctaagaagcacggatatctggctggccccttttctggctggcatccgc
agccgtgaggcgctggcccgattggacttgctcccggccctgcaagcgcagttgccctgg
ccgctggcctcgcaactggatgatctggcccccacccacctcaccgtgcccagtggcaac
cgtatccggctggactacgcccccgacggcagccccccggtgctggcagtcaaggtgcag
gagctgttcggcctcaatgacacgccgacggtgaatgcgggccggaccgccgtgttgctg
cacctgctatcccccgcccgccgcccggtccaggtcacgcaggacctccgctccttctgg
caacacggttacttcgaggtgcgtaaggatctgcgggggcgctaccccaagcacccctgg
ccggatgacccagccagtcacgcgcccaccgccaagacgaaacgggcgctggagcgcggc
tga
DBGET
integrated database retrieval system
