Danio rerio (zebrafish): 100003938
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Entry
100003938 CDS
T01004
Symbol
apba1a
Name
(RefSeq) amyloid beta A4 precursor protein-binding family A member 1 isoform X1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100003938 (apba1a)
Membrane trafficking [BR:
dre04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
100003938 (apba1a)
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
100003938 (apba1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
PRT6_C
Motif
Other DBs
NCBI-GeneID:
100003938
NCBI-ProteinID:
XP_001343372
ZFIN:
ZDB-GENE-060526-175
Ensembl:
ENSDARG00000103848
UniProt:
A0A8M1Q7S5
LinkDB
All DBs
Position
5:52626066..52730813
Genome browser
AA seq
968 aa
AA seq
DB search
MSHQEAPHGQELREAAEADLERRGPEGQQPPSSHRRRHNNGDGSSRSNRSRNHGTENNHH
QSQHQGAPRYRRCEGSNGGTNRTHAARRPEEEGDAEQQTIQQPIPRPAVTRYRRQGDNEA
RLRAQQQRQRQRERQQRDAERAEQHRLEQQQQLLSPTQTMLPTREPEEAEEDEGDGSSAL
ARSASTESGFHNHTDRAEGDAVMVLEAEPEDENTYGIPLRPEAEEYTESAESEQQHGGPA
YLQPQYPPQPPPLPREPLPNAERPLEAETLNPNYSSYVYTQPMYHNPTEAGEAHEGGATE
DEQYSEPYVDYTLQEHVYEEITDAPLSRAEGQTPQQQRPEFRLFERDLYQQQEAVGSRLH
HYDERSDGESDSPEKEAEFAPYPRADSCEQDEDIDQIVAEVKESLSSQSLDRIAMGLNKD
GDKEEDWPESESHGQLNDNNPLEPVSEGELPRSPSEDQAPVIRSSREKRDAISLAIKDIK
EAIEEVKTRTVRSPYTPDEPKEPIWVMRQDLSPTAESDLQPSLGADSPGSGSTSPQGAES
SSHQMMSQEGSDSFESPSPAGKESRRSLASFPTYVEVPGPCDPEDLIDGIIFAANYLGST
QLLSDKTPSKNVRMMQAQEAVSRIKTAQKLAKNKKKAPEGDAQPMTEVDLFISTQRIKVL
NADSQETMMDHPLRTISYIADIGNIVVLMARRRMPRSDSQENMEASDPAQDEKRQYKMIC
HVFESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIHFS
KSENCKDVYIEKQKGEILGLVIVESGWGSILPTVIIANMMHGGPAEKSGRLNIGDQIMSI
NGTSLVGLPLSTCQSIIKGLKNQSRIKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIIC
SLMRGGIAERGGVRVGHRIIEINSQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLT
AQEQPVYI
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccaggaggcaccacatggccaggagttgagagaggcagctgaggcagatcta
gagcgtaggggcccagagggtcaacagcccccctcatcccaccgtaggcgccacaataat
ggagatggcagctctcgctccaatcgctcccgaaaccatggcacagagaataatcaccac
cagtcccaacatcagggagccccacgctaccgcagatgtgagggatccaatggagggacg
aatcgcacacatgcagcgaggaggccagaagaagagggagatgcagagcagcaaaccatt
cagcagcccataccaagacctgcagtgacacgctaccgcagacagggggacaatgaggcc
agactccgggcacagcaacagagacagcgtcagcgggagaggcagcaaagagatgcagag
agagccgagcagcacagactggagcaacaacagcaactcctctcccctacgcaaaccatg
ctgcccaccagagaaccagaggaagctgaggaagatgaaggagatggcagcagtgctttg
gcccgatctgccagcactgagagtggattccacaaccacacagaccgggcagagggggat
gcagtcatggtgctggaagcggagcctgaagatgaaaacacttatggtatcccacttcgt
ccagaagcagaagagtacactgagagtgcagagtcagagcaacagcatggaggtccagct
tatcttcaaccccagtatccacctcagccacccccactacctcgagagcccctacctaat
gcagagagacctcttgaagcagagactctaaacccaaactactccagttatgtttacaca
cagcccatgtaccataatcccactgaagctggagaggcccatgaaggaggagcaacagaa
gatgagcaatattctgagccctatgttgattacacccttcaggagcatgtttatgaagaa
atcacagacgctcccttgtccagagctgagggacagactcctcaacaacaaaggccagag
ttcagactctttgaacgtgacttgtatcagcagcaggaagctgttgggtccagactccac
cactatgatgagcgatctgacggagagtcagacagccctgaaaaggaggcagagtttgcc
ccatacccccgcgcagacagttgcgagcaagatgaagatattgaccagattgtggcagag
gtcaaggagagtctgagctcacaaagcctggatcgtattgccatgggcttgaacaaagat
ggggataaagaagaagactggcctgagtcagagtcccatggtcaattaaatgacaacaac
cccctggagccagtgagtgaaggagagctccccagaagtccttcagaagaccaagctcca
gtcatcaggagcagtcgtgagaagagagatgcaatttcactggctattaaggacatcaag
gaggcaatagaggaggtgaagacaaggacggtccgctcgccttacacaccagatgagccc
aaagaacctatctgggtaatgaggcaagacctgagtcctacggcagaatctgacctacag
ccatctttgggagctgattctccaggatcaggctccacctcccctcaaggggcagaatca
tccagccatcaaatgatgtcacaggaggggagtgacagctttgagtctccatctccagct
ggtaaagagtcaagaagaagtcttgcttcattcccaacatatgtggaagtaccagggccg
tgtgacccagaggaccttattgatggtattatctttgctgctaactacctgggatccacc
cagctgctctcagacaagacaccctccaaaaatgtgcgcatgatgcaggctcaggaagct
gtgagtcgcattaagacggcccagaaattagccaaaaacaagaagaaggctccagaaggc
gatgctcagcccatgacggaggtggacctcttcatttctactcagagaatcaaagtgctc
aatgcagactcacaggagaccatgatggatcaccctttaaggaccatctcctatattgct
gatattgggaacattgtggtgctgatggccagaaggagaatgcctcgctctgactctcag
gagaacatggaggcctctgatccagcccaggatgagaagcgccaatacaagatgatctgt
cacgtctttgagtctgaagatgctcagctcatagctcagtccatcggccaggctttcagc
gtggcttaccaggagttcctgcgtgccaatggcatcaacccagaggatctgagccagaaa
gagtacagtgacctccttaacacacaggacatgtacaacgatgaccttattcacttttcc
aagtctgagaactgcaaagatgtttacatagagaagcagaagggagagattcttgggttg
gtgattgtagagtcgggctggggctctatcctgcccactgttattatagcaaacatgatg
catgggggcccggcagagaagtctggcagactgaacatcggggaccagatcatgtccatc
aatggcaccagcctggtgggattgcccctctccacctgccagagtattatcaagggattg
aagaaccaatctagaataaagctcaacattgtgagatgcccacctgtgaccactgtcctc
attagaagaccagatctgagataccagctggggtttagcgtgcagaatggcattatttgc
agtctgatgagaggagggatagcagaacgaggtggggtgcgtgttggccaccggatcatt
gagatcaatagtcaaagtgttgtggccacccctcatgaaaagattgtacacattctgtcc
aatgcagttggtgagattcacatgaagactatgccagctgccatgtaccgcttgctaaca
gcccaggagcaacctgtttacatctaa
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