KEGG   Danio rerio (zebrafish): 100330570
Entry
100330570         CDS       T01004                                 
Symbol
polr2ea
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03020  RNA polymerase
dre03420  Nucleotide excision repair
dre04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100330570 (polr2ea)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100330570 (polr2ea)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    100330570 (polr2ea)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    100330570 (polr2ea)
   03400 DNA repair and recombination proteins [BR:dre03400]
    100330570 (polr2ea)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100330570 (polr2ea)
  RNA polymerase III system
   RNA polymerase III
     100330570 (polr2ea)
  RNA polymerase I system
   RNA polymerase I
     100330570 (polr2ea)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100330570 (polr2ea)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 100330570
NCBI-ProteinID: XP_002661023
ZFIN: ZDB-GENE-100630-1
Ensembl: ENSDARG00000074274
UniProt: E7FDD7
LinkDB
Position
2:56658162..56671531
AA seq 210 aa
MDDEEETYRLWKIRKTVMQLCHDRGYLVTQDELDQTLDEFKIQFGDRPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEELKVGIKTIKMYCQRMQEENITRAVIVVQTGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKETQLPRIQCSDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaagaggagacttatcgattatggaaaatccggaagaccgtaatgcagctg
tgccatgaccgcgggtatctggtgacgcaggacgagctggaccaaaccctggatgagttc
aagattcagtttggagatcgacccagcgagggacgacccagacgcactgacctcaccgtt
ctggtggcccacaatgacgatcccacagatcagatgttcgtcttcttcccagaggagctt
aaagtgggcatcaagaccattaagatgtactgccagcgcatgcaggaggagaacatcact
cgagctgttattgtggtgcagacgggcatgacaccatctgccaaacagtctctggtggac
atggcaccaaaatacatcctggagcagtttctccagcaggagctgctcataaacatcacc
gaacacgagttggtgcctgaacacattgttatgacaaaagaggaagtgaccgagctgttg
gccagatataaactgaaggagacccagttacccagaattcagtgtagtgatccagtggcg
cgatactttggtctgaaacgaggacaggtggtgaagatcatccggcccagtgaaacggct
ggacgctacatcacatacagactcgtgcagtga

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