Danio rerio (zebrafish): 30327
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Entry
30327 CDS
T01004
Symbol
cyt1
Name
(RefSeq) type I cytokeratin, enveloping layer
KO
K07604
type I keratin, acidic
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dre04812
]
30327 (cyt1)
04147 Exosome [BR:
dre04147
]
30327 (cyt1)
Cytoskeleton proteins [BR:
dre04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
30327 (cyt1)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
30327 (cyt1)
Exosomal proteins of other body fluids (saliva and urine)
30327 (cyt1)
Exosomal proteins of colorectal cancer cells
30327 (cyt1)
Exosomal proteins of melanoma cells
30327 (cyt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF2461
Nuf2_DHR10-like
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
30327
NCBI-ProteinID:
NP_571182
ZFIN:
ZDB-GENE-991008-6
Ensembl:
ENSDARG00000092947
UniProt:
Q9PWD8
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All DBs
Position
19:complement(5362564..5364596)
Genome browser
AA seq
429 aa
AA seq
DB search
MMSSSSIRMSSGGSSRLSVGGGASRVSGVRAGSVYGGAGGSGVRISSSSASRSYSAGGGA
GFGGGAGAGFNLSDAIDVPTNEKATMQNLNDRLASYLEKVRSLEKANADLELKIRQFLDS
KATPNARDYSAYYATISDLQAKILHATGVNGGIYLSIDNAKLAADDFRVKYENELSMRQS
VEADIVGLRKVLDELTMTRSDLELQIEGLKEELIFLKKNHEEELLAARTQMSGQVNVEVD
AAPQEDLTKILADIREHYEAVSAKNRKDLESWFQAKSESLNKEVAVSTETLQTSRSEITE
VKRTLQSLEIELQSQLSMKASLEGTLADTQARYTNMLNGYQFQVSSLEEQLIQLRADLER
QGQEYQMLLDIKTRLEMEIAEYRRLLDGEATTVSTSSSTTRKVVTIVEEVVDGKVVSSSS
KATTETKTT
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcttcatccatccgcatgtcctcaggaggatcttctcgcctctctgtcggt
ggtggagccagtcgtgtctcaggagtgcgtgctggtagtgtctatggaggagcaggagga
tccggtgttcgcatctccagttcttctgcttccagatcctactctgctggtgggggcgca
ggatttggtggtggtgctggtgctggcttcaacctgtctgatgccattgacgtgccaaca
aatgagaaagccaccatgcaaaacctcaatgaccgtctggcctcctacctggagaaggtg
cgcagcctggagaaggccaatgcagatcttgagctgaagatccgccagttcctggacagc
aaggccacgcctaatgctcgtgactacagtgcctactatgcaacaatcagtgacctccag
gcaaagatcctgcatgctactggtgtaaatggaggcatctacctcagcattgacaatgcc
aagctggctgcagatgacttcagagtcaagtatgagaatgagctgagcatgaggcagtct
gtggaagcagacattgttggcttgaggaaggtgctggatgagctcacaatgaccagatct
gacctggagttgcagatcgagggtctgaaagaagaactgatcttcctcaagaagaaccac
gaggaggagctcttggcagcacgcacccagatgagtggacaagtcaatgtagaggtcgat
gcagcaccacaggaagacctgacaaagatcttggctgatatccgtgagcactatgaggca
gtttctgccaagaaccgtaaagatcttgagagttggttccaggccaagagtgagtccctc
aacaaggaagttgctgtgagcacagaaactctccaaacctcccgctctgaaatcacagag
gttaagcgcacactccagagtcttgaaatcgaactacagtcacaactcagcatgaaagcg
tcattggaaggcactctggcagacacacaggcccgctacaccaacatgttgaatggttac
cagttccaggtgagcagcctggaagagcaactgatacagctccgtgctgatctggagcgc
caaggtcaagagtaccagatgcttctggacatcaagaccagactggagatggagattgca
gagtacagaagactgctggatggagaggctactactgtttccacaagctcaagcactaca
cgcaaagtggtaaccattgtggaagaggtggtggatggaaaagtggtcagctcatcctcc
aaggccacaaccgagactaaaaccacttaa
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