KEGG   Danio rerio (zebrafish): 30670
Entry
30670             CDS       T01004                                 
Symbol
thraa
Name
(RefSeq) thyroid hormone receptor alpha-A
  KO
K05547  thyroid hormone receptor alpha
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    30670 (thraa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    30670 (thraa)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:dre03310]
    30670 (thraa)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    30670 (thraa)
Nuclear receptors [BR:dre03310]
 1. Thyroid hormone like
  1A. Thyroid hormone receptor (THR)
   30670 (thraa)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 30670
NCBI-ProteinID: NP_571471
ZFIN: ZDB-GENE-990415-263
Ensembl: ENSDARG00000000151
UniProt: Q98867 B2GQG7
LinkDB
Position
3:complement(34697276..34754126)
AA seq 427 aa
MENTEQEHNLPEGDETQWPNGVKRKRKNSQCSMNSTSDKSISVPGYVPSYLEKDEPCVVC
GDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYDSCCIIDKITRNQCQLCRFRKCI
SVGMAMDLVLDDSKRVAKRRLIEENREKRKKEEIVKTLHNRPEPTVSEWELIRMVTEAHR
HTNAQGPHWKQKRKFLPEDIGQSPAPTSDNDKVDLEAFSEFTKIITPAITRVVDFAKKLP
MFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVSREQLKNGGLGVVSD
AIFDLGKSLSQFNLDDSEVALLQAVLLMSSDRSGLTCVEKIEKCQEMYLLAFEHYINHRK
HNISHFWPKLLMKVTNLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEGSTGVAAQ
EDGSCLR
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggaaaacacagagcaggagcacaacctgccagaaggagatgagacgcaatggccaaat
ggagtgaagaggaaaagaaagaatagtcaatgctctatgaacagcacatccgacaagagc
atctctgttcctgggtacgttcccagttatctggagaaagatgagccgtgtgtggtgtgc
ggagacaaggccactggctatcattaccgctgcatcacatgtgagggctgcaagggtttc
ttcaggaggacaatacagaaaaaccttcatccgtcctattcctgtaaatatgacagctgc
tgcatcattgacaaaatcacccgcaaccagtgccagctgtgccgcttcaggaagtgcatc
tcagtgggcatggccatggacttggtgctggatgattcgaagcgcgtggccaagaggcgt
ctgatcgaagaaaatcgggagaagagaaagaaagaggagattgtgaagacgttacacaat
cgacctgagcccaccgtgtcagagtgggaactcattcgtatggtgacggaggctcatcgg
cacaccaatgcccagggccctcactggaaacagaaacgcaagttcctaccagaagacatt
ggacagtctccagccccgacatcagacaatgataaagtggacctggaggccttcagtgag
tttaccaagatcattacgcctgccatcacacgagttgtggactttgccaaaaaactgccc
atgttctctgagctgccctgtgaagaccagatcatcttgctgaaaggctgctgtatggag
atcatgtcattgcgagcagcggtgcggtacgaccccgagagcgagactctgaccctgagc
ggagagatggccgtcagtcgagagcagctgaaaaacggagggctcggagtggtttctgat
gccatctttgatttggggaagagcctgtcacagtttaacctggatgactctgaggtggca
ctgctacaagctgtgctgctcatgagctcagatcgctctggactgacatgtgtggagaag
atcgagaagtgtcaggagatgtacctgttggcattcgagcactacatcaaccaccgcaag
cacaacatctcccacttctggcccaagctgctgatgaaggtgacgaacctgcgcatgatc
ggcgcctgccacgccagccgcttcctgcacatgaaggtggagtgtccaacagaactgttc
ccgccgctcttcctggaggtcttcgaggatcaggagggaagcactggagtggcagcacag
gaagacggttcctgcttaaggtga

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