Danio rerio (zebrafish): 404627
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Entry
404627 CDS
T01004
Symbol
six1b
Name
(RefSeq) homeobox protein six1b
KO
K15614
homeobox protein SIX1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
404627 (six1b)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
404627 (six1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
404627
NCBI-ProteinID:
NP_996978
ZFIN:
ZDB-GENE-040426-2308
Ensembl:
ENSDARG00000026473
UniProt:
Q6NZ04
LinkDB
All DBs
Position
20:20499923..20501818
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AA seq
284 aa
AA seq
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MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENSENNNTGANKQNQLSPLDGGKSLMSSSEDEFSPPQSPDQNSVLLLQGNMSH
PGASAYSMTGLGAAQSVHGMQGHPHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgttgccttctttcgggtttacgcaggagcaagtcgcgtgtgtgtgtgaggtg
cttcaacaaggggggaacctcgagcgtctcggacgatttctgtggtctctcccggcttgc
gatcatctccacaaaaacgaaagcgtcctcaaagccaaggctgtcgtcgccttccatcgt
ggaaacttcagggaactttataagatactagagagccaccagttctctccgcacaaccac
ccgaagctgcagcagctgtggcttaaggcccattacattgaggctgagaagctgaggggg
cgaccgctgggagccgtggggaaataccgagtgcgcaggaaatttcctctgcctcgcaca
atatgggacggagaggagaccagctactgttttaaggagaagtcccgcggggtgctgcga
gagtggtacacgcacaacccctatccatctcctcgggaaaagagggagctggccgaggcc
acaggactgactaccacacaagtgagcaactggtttaaaaacagacggcagagggatcgc
gcagcggaggcgaaagaaagggaaaacagcgagaacaacaacacgggcgctaacaaacag
aaccagctgtcaccgctggacggcgggaagtccctgatgtcgagctcggaggacgaattc
tcgcccccgcagagtcctgaccagaactccgtgctcctgctccagggtaatatgagccac
cccggcgcgtccgcgtactccatgaccggtctcggcgccgcacagtcggtacacggcatg
caaggacacccacatcagctccaggattcattactgggacctttaacttcaagtctagtg
gacctaggctcttaa
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