Danio rerio (zebrafish): 415149
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Entry
415149 CDS
T01004
Symbol
lum
Name
(RefSeq) lumican precursor
KO
K08122
lumican
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
dre00535
]
415149 (lum)
Proteoglycans [BR:
dre00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
415149 (lum)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
415149
NCBI-ProteinID:
NP_001002059
ZFIN:
ZDB-GENE-040625-24
Ensembl:
ENSDARG00000045580
UniProt:
Q6IQQ7
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All DBs
Position
4:complement(16351388..16354268)
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AA seq
344 aa
AA seq
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MFALGSILLAGLLSLSLAQYDYYDEYYIPSAPLEGVSSPSCAQECECPINFPTAMYCNER
NLKFIPIVPTGIKYLYLQNNFIEEIKAGVFDNATDLRWLVLDNNNITSDKIQAGTIDKLG
SLEKLLFSHNKLTKPPGSLSKSLDELKLIGNKLTSFPANTLAGMENLTTVHLSKNKLTTE
SLTGAFKGLKSLILLDVSENKLKKLPSGVPASLLMLYADNNDIDSIPNGYLAKLPLLQYL
RISHNKLVDSGVPAGVFNVSSLLELDLSFNKLKTIPEINESLEHLYLQVNEINKFELTNI
CRFSSPVNYSRLRTLRLDGNNITHSSMPDDTANCLRQASEIIFE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctctgggatccatcctgttggctggacttctaagtctgagtttagctcagtat
gattactatgatgagtactacataccctctgcaccactggagggcgtttcatcaccttct
tgtgcccaggagtgcgaatgtcccatcaactttcccactgccatgtactgcaatgagcgc
aacttgaagttcatccccatcgtgccgaccggaatcaaatacctctacttacagaacaac
ttcattgaggagatcaaggctggagtgtttgacaatgccaccgaccttcgctggctcgtc
ctcgacaacaacaacatcaccagtgacaagatccaggctggtactatcgataaactaggg
agcttggagaagctcctcttcagtcataacaagctgactaaaccccctggttctctttcg
aagtctctggatgagttgaagttgatcggtaacaagttaacctcattccctgctaacact
ttggctgggatggaaaacctgactaccgtccacttgtccaagaacaagcttaccaccgag
agcctcacaggagccttcaagggcctcaagtccctcattctgctggacgtgagcgagaac
aagctcaagaaacttccctcgggagttccagcttcgcttttgatgctctacgctgacaat
aatgacatcgacagcatccctaacggctacctggcaaagctgccactcctacagtacctg
cgcatctcccacaacaaacttgtagactcaggggtccctgcaggagtgttcaatgtgtcc
tctcttcttgagcttgacctgtctttcaacaagctgaagaccatcccggagatcaacgaa
tcactagaacacctctacctgcaagtcaatgagataaacaagtttgagctgacgaatatc
tgcaggtttagctcaccggtcaactactctagactgaggaccctgcgcttggatggaaac
aacatcacacacagcagtatgccagatgacacagctaactgcctacgccaggcctcagag
atcatctttgaatag
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