Danio rerio (zebrafish): 570385
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Entry
570385 CDS
T01004
Symbol
lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
570385 (lrrtm1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_1
LRRNT
DUF4750
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
570385
NCBI-ProteinID:
XP_005160139
ZFIN:
ZDB-GENE-050506-80
Ensembl:
ENSDARG00000052713
UniProt:
B8JKM0
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All DBs
Position
1:complement(42774784..42779653)
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AA seq
524 aa
AA seq
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MLMDFLLIGLYLKWPLRKPPGLILCSLGIVLKIVPLVGGSCPRLCRCDNKQLYCEGLNLT
DIPQNLSSAIGLSLRENNISELREGNFVGLSQLTWLYLDHNNIEIVEESAFERLRRIKEL
DLSTNRIESLPNGTFRPLPNLRILDLSYNRLQSLEPDLFHGLRKLTNLHLRYNALKFIPV
RIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTL
YMRNNKATIVVNTLEWTWDYLEKIDFSNNEIEYIEPHVFESVPKLNTLMLDSNKLTYIDQ
RILDSWTSLSSITLSGNDWECSRNVCALASWLSNFQGQRDSGLLCANPDIAQGEDILDAV
YAFQLCEDNVEATTQTFTVTRNRPRGFIYEGPTKNPYDLQDMEGGEVVTNSLTVTASADD
LESTMKIHKVVTGTMALIFSFLIMVLMLYVSWKCFPAGVRQLRQCFTSQRRKQKQKQTMQ
QMATTSASEYYVDYKPNHIDGGLVIINEYGSCKCQQQASRECEV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggatttccttctaattggtctgtacctaaagtggccgctaaggaagccccct
gggctgatactgtgctccctgggcattgttctgaaaatagttcctttggtgggggggagc
tgtccgaggctgtgccgatgcgacaacaagcagttgtattgtgagggactcaacctgaca
gatatcccccaaaacctgagcagcgccattggtttgtccctacgtgagaataacatctct
gagctgcgggaagggaactttgtgggcctgtcacagcttacctggctctacttggatcat
aacaatattgagattgtcgaggagagtgcttttgagaggctgcgaaggattaaagagctg
gatctgagcaccaaccgtatagaaagtctgcccaacgggacctttagacctctgcccaat
ctgcgaatactggatttatcctataacagacttcagtccttggagccagaccttttccat
ggccttaggaagcttaccaatttacatttgcgctacaatgcccttaaattcatccctgtg
cggattttccaggattgcaggagcatgcaattcctggatctgggttacaaccagctgcag
agcctggcacgtaattcatttgccggactctttaagcttactgagctgcatctggagcac
aatgagttggtgaaagtcaacctagcccatttcccccgcctcatatccctgcggactctc
tacatgagaaacaataaggccaccatagtggtcaacacccttgagtggacctgggactac
ttggagaagattgacttctccaacaatgagatcgagtacatcgagccacatgtgtttgag
agcgtgcccaaactgaacactctcatgctggactctaataaactgacttacatagatcaa
cggattttggactcatggacatcactgagcagcatcacactgtcagggaatgactgggaa
tgcagcaggaatgtctgtgccttggcttcctggcttagcaatttccagggacaacgtgac
agtggcctgttgtgtgccaacccggacattgcacagggtgaggacattctggatgctgtc
tatgcttttcagttatgcgaggacaatgtggaagcaaccacacagaccttcactgtcacc
agaaaccgacccagaggcttcatatatgagggcccaacaaaaaatccctacgacctacag
gatatggagggtggggaagtggtgaccaactccttaacagtgaccgcttctgctgatgac
ctggagagcaccatgaagatccacaaagtggtgacaggaaccatggccctcattttctcc
tttctgatcatggtcctcatgctctatgtgtcgtggaaatgtttcccagcgggtgtcagg
cagttgaggcagtgcttcaccagccagcgtcgcaagcagaagcagaagcagaccatgcag
cagatggctactacgtctgcatccgagtactacgttgactacaaacccaaccatattgat
gggggacttgtcatcatcaatgagtatggttcttgcaagtgccagcaacaggcatctcga
gagtgcgaagtgtga
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