Desmodus rotundus (common vampire bat): 112313739
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Entry
112313739 CDS
T05907
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112313739 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dro03041
]
112313739 (PRPF38B)
Spliceosome [BR:
dro03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
112313739 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
112313739 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
112313739
NCBI-ProteinID:
XP_024426115
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAAAQQQQQQPCGGGAPTKPAVSGKQGNVLPLWGNEKTMNL
NPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRG
VGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWF
ESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPR
KIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGCSSFDRELERE
KERQRLEREAKEREKERRRSRSIDRGLERRHSRSRERHRSRSRDRKGDRRDRDREREKEN
ERGRRRDRDYDKERGEDREKDRERSRERSKERRSRGEVEEKKHKDDKDDRRHRDDKKDSK
KEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKASKHKGESKEKSSKRSRSGSQGRTD
GAEKARKRERSPSREKSRRRSRSKERSHRRDHSDGKDQSDRHDHRRSQSTEPESQDKQHK
DRDEAV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggccgcg
gccgcagcccagcagcagcagcagcagccgtgcggcggcggagcccccaccaagccggcg
gtctcgggcaagcagggcaatgtgctgccgctctggggcaacgagaagactatgaacctc
aaccccatgatattgaccaatatcctgtcgtcgccttacttcaaagtgcagctctacgag
ctcaagacctaccacgaggtggtggacgagatctactttaaggtcacacatgtcgaaccg
tgggagaaaggaagcaggaagacagcgggccagacagggatgtgcggaggggttcgtggt
gttggaacaggaggaattgtttctacagccttctgcctgttatacaagttatttaccctg
aagttaactcgcaagcaagtgatgggtctcataacgcacacagactctccgtatattaga
gcccttggattcatgtacataaggtacacacagccccctacagacctctgggactggttt
gaatccttccttgatgacgaagaggacctagatgtgaaggccggcgggggctgcgtgatg
accatcggggagatgctgcggtcttttctcactaagctggagtggttttcgaccctgttt
ccaaggatcccggttccagttcagaagaatattgaccagcagataaagacccggcctagg
aaaatcaagaaagatgggaaggaaggcgctgaggaaatagacagacatgttgaacgcagg
cgttcgaggtctccaaggagatcactaagtccacggaggtccccaagaagatcaagaagt
agaagccatcatcgggagggccatgggtgttctagttttgaccgagaattagaaagagag
aaagaacgccagcgactagagcgcgaagctaaagagagagagaaagaaaggcgaagatcc
cgaagtattgatcgggggctagagcgcaggcatagcaggagtagggagaggcatagaagt
cgaagtcgtgacaggaaaggagatcgaagggacagggatcgggaaagagagaaagaaaac
gagagaggtaggagacgagatcgtgactacgataaggaaagaggcgaggaccgagaaaag
gacagagagcgatccagggaacggtccaaggaacggagaagtaggggtgaggtggaagaa
aaaaaacataaagatgacaaagatgatagacggcatagagatgacaaaaaagattccaag
aaagagaaaaaacacagtagaagcagaagcagagaaaggaaacacagaagtaggagtaga
agcaggaacgcagggaagcggagcaggagcaggagcaaagagaaggcgagcaagcataaa
ggtgaaagcaaggaaaagtccagcaaacggagtcgcagtggcagtcaagggaggactgac
ggtgctgaaaaggcgagaaagcgggagcgcagccccagcagagagaagtccagaaggcgc
agcagaagcaaagagcgctcccacaggcgggatcacagtgacggcaaggaccagtctgac
agacacgaccaccggaggagccaaagcacagagccggagagccaggacaagcagcacaag
gacagagacgaggctgtgtga
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