Dehalobacter restrictus: DEHRE_04670
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Entry
DEHRE_04670 CDS
T02996
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
drs
Dehalobacter restrictus
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drs03400
]
DEHRE_04670
DNA repair and recombination proteins [BR:
drs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DEHRE_04670
Archaeal homologous recombinant proteins
DEHRE_04670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
SMC_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHF09453
LinkDB
All DBs
Position
915784..918927
Genome browser
AA seq
1047 aa
AA seq
DB search
MKPLKVVMSAFCPYAGRTELDLAAFGGQGLFLITGDTGAGKTTIFDAIAFALFGEVSGCT
RTVDTLRSDFAEPNAKTYVEFTFLHKDKMYSITRNPRYERPKKSGDGVTTENSDATLQLP
DGDIITGYRDVTAEIVELLGINYRQFKQIAMIAQGEFLQLLLADSKERGDIFRRVFNTDL
YQTAQRLLKDSERESKKRCESIEQSIFQYISGIACPESEQGQILSAKIGTATIHTAEDIL
SELQALITVDTTLRDSLKQQVDKLDKDLASQIAIIMQAQYINQAFNDLKIVQEKRNALIE
RQGEHNVQKKMLQDAEKALYIVSPLEAAFLREQEAEQKLTQSIMALDIEIQAQIKDLETV
QTAYQAEKEKEPEREKLASAIDRLTKMLPQYEASELLERELEKLTEKQSAVCAALGELQQ
QKADLLEQKNNLNQELERLADIEAKAAVCEQEAKQLQATQSGLLDLQNFLSGLSKLQSES
ARLQQQFTSAQGAFQTVNTVYMEKETAFFREQAGLLAASLEDGNPCPVCGSTVHPNKATL
GADAPIEAELNELKQKSDLARQNMQEASEQSAAKLAEVKLAREQLVHAAGAYFPDVDKSI
MQEQLATLIESALAESRQKKKENDDHYLQLKKQVSRKNQSKEQLASLEGSLQTNEEATTQ
NEQQKNNIISDIASKTGELKVLKSSLEYADRQQAVASIEEWTGNLNSLKEAFRQAEEAYH
ALQNKLEGNQTLLSDQRERLSNTIQTKQQALAAYTKKLSECDFPNEEAYHSALKTESEIS
ELKHSIDQYQNEVQAVEQDLRRLFKETENKQKQDMEQLEAAKQKLEQEKRKADESIRTLI
ARLGTNEPITKAFGRAISDAAIYQQEYLLLSNLSKTANGELGGKQKLAFEQYVQASYFNQ
ILIEANKRLKIMTNSRFELLRREDAADLRAQTGLEIDVLDHYTGRIRSVKSLSGGESFKA
SLSLALGLSDVIQSYAGGVEIDTLFIDEGFGALDTESLEQAMQTLIGLAAGNRLVGIISH
VSELKERIDRQVVIMKSNRGSSINLIS
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgttaaaagtagtgatgagcgccttttgcccctatgccggcagaactgaactg
gatctggcagcatttggtggtcagggattatttctcattaccggtgataccggcgctgga
aagacaaccatttttgacgccatcgcatttgcactgtttggcgaggtgagcggttgcacc
agaaccgtggacaccctgcgcagtgattttgcagagcctaatgctaagacttatgtcgaa
tttacctttctgcataaagacaagatgtactccataacgcggaatccccgctatgagcgg
cccaaaaagagcggcgacggggtaacgactgaaaattccgatgccacgctgcaactgcct
gacggagacatcatcaccggctatcgggatgttacggcagaaatcgttgagcttttaggt
atcaactatcgacagttcaagcaaattgctatgattgcccagggtgaatttctccagctt
ttgcttgcggacagtaaagaacggggcgatattttccggcgtgtattcaataccgatctt
tatcaaactgcgcaacgcttattgaaagacagtgaacgcgaatctaaaaagcgctgtgag
agcattgagcagagcatctttcaatatatctctggaatcgcctgtcctgaaagtgagcaa
gggcagatactatccgcgaagataggcacagctaccatacataccgcggaggatatcctg
tcagaattacaggctttgatcacagtggacacaactcttcgggatagcttaaagcagcag
gtagataaactggataaggatcttgcttcgcagattgccataatcatgcaggcccaatat
attaatcaagcctttaacgatttgaagatcgtccaagaaaagcggaacgctctgatcgag
cgtcaaggggaacataacgttcagaagaaaatgttgcaggacgcggaaaaagcgctatat
atcgtctctcccctggaagccgcatttttgcgggagcaggaggccgaacagaaattaaca
cagagcatcatggcactggatattgaaatacaggcacagataaaagacctggaaacagta
caaacggcctaccaagcagagaaagaaaaggaaccggagcgggaaaagcttgcttccgca
attgatcggcttacaaaaatgcttccccagtatgaagcttccgagctacttgaaagagaa
ttggaaaaactgacggaaaagcaatcggcagtttgtgcggcgctgggagaactccaacag
caaaaagcggatcttttggagcagaaaaataacctcaatcaagaattggagcggcttgcg
gacatagaggcaaaagcggcagtctgtgagcaggaagcaaaacaactgcaagccactcaa
tccggattgcttgatctacagaattttttatccgggctcagcaaattacaaagtgagagc
gccaggctgcagcagcagttcactagtgcacaaggggcattccaaaccgttaatacagtt
tatatggaaaaagaaactgcttttttccgtgaacaggcgggacttctggcggcatcactg
gaagatggaaatccctgccctgtatgtggttccactgttcaccccaacaaggcaacgctg
ggcgcggatgctcctatcgaggcagagctgaatgaattaaaacaaaaaagtgaccttgcc
cggcagaatatgcaggaagccagcgaacagtcggctgcaaagctggcggaagtcaaactg
gcgcgggaacagttggtacatgctgccggagcatatttccccgatgtcgataagagcatc
atgcaggagcaacttgcgaccctgatcgaatcagccttagcagaaagcaggcaaaaaaag
aaagagaatgacgatcactatctccaattgaaaaaacaagtctctcgtaaaaaccaatct
aaggaacaacttgcatctttagagggatccttacagaccaacgaggaagcaacgactcag
aacgaacaacagaaaaataacatcatctcagatattgcttccaagaccggagaactcaag
gtgctgaaatcctctttggagtatgcagaccgccaacaggctgtggcatctatagaagaa
tggacgggaaatctaaattctttgaaagaagctttcaggcaagctgaagaagcatatcat
gcacttcaaaacaagttggaggggaaccaaactcttcttagcgaccagagagaaagactg
agcaacaccatccaaacaaaacaacaggcactggcagcttacacaaaaaagctgtctgaa
tgtgattttcccaatgaagaagcctatcatagcgcattgaaaacagaatcggaaatcagc
gagttaaaacattctatcgaccagtatcagaatgaagtccaagctgtagaacaggattta
cggaggcttttcaaagaaaccgaaaacaagcagaagcaggatatggaacagcttgaagcc
gcaaaacaaaagctggagcaggaaaaaaggaaggcggatgaatctattcggacgctgata
gcgcggttgggaaccaatgaaccgattacaaaagctttcggcagagcaatctcagacgca
gctatctatcaacaggaatacctccttctgagcaatctttcaaaaacggcgaacggcgag
ttgggcggcaaacaaaagctggcttttgagcagtatgtacaggcttcatactttaaccag
attcttattgaggcaaacaagcggctgaagattatgacaaacagccggtttgagcttctg
cgcagagaagacgcggcagatctccgtgctcagaccggactggaaattgatgttttggat
cattataccggccggatacgttcggtaaagtcgctgtccggcggagaatcctttaaagca
tccctgtccctagcgctgggactttctgacgtgattcaaagctatgccggcggcgtggaa
atcgatacattgtttattgatgaaggctttggagcactggataccgagtcattagagcag
gcaatgcagacacttataggtcttgcggcgggaaatcgtctggtcggcataatttctcat
gtgagtgagctgaaagagcggattgaccggcaggttgtgattatgaagagtaatagggga
agtagtattaatctcatttcttga
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