Desulforamulus ruminis: Desru_1385
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Entry
Desru_1385 CDS
T01518
Name
(GenBank) sigma-54 factor interaction domain-containing protein
Organism
dru
Desulforamulus ruminis
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
Mg_chelatase
AAA
MCM
VpsR
bpMoxR
AAA_7
HTH_30
AAA_16
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AEG59657
UniProt:
F6DQ79
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Position
1403324..1404865
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AA seq
513 aa
AA seq
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MTATPSILVIDDEQPVGTFFTRLLAQKGYRIGVAVSGTQAHALIDQERYDVAMVDLKLPD
TDGITLLQHIKTVQPHCEVVIMTGYSTTRTAVKAIQFGAFDYIEKPFDDINLVEQLIEKA
LNYSKTVEKPGDKTFSWTDTAEQCGFQVGHTPKMIKLVSMAERIASKDINVLIHGETGTG
KEVLAKFIHMASNRHDKPFLAINCGALPENLLESDLFGHEKGSFTGANVQRKGIFELANN
GTLFLDEIGEASLAIQVKLLRVLETGEFLRVGGEKPVKTNVRIIAATNVDLEEAVAHKTF
REDLFYRLDVVRFVLPPLRERKEDIVSLVEFFIQRFWDYQTGPTPTFAPACMDALLNYHW
PGNIRELANTVEQALALCDDKAVLPEHLSRKITGATPALEKNDPEGGEDTLPDINGLSGW
FCQQEKQLDKMDEERLVHLYKRVEELYRALHRVMGKKGVTSAFPISIQEMEARAIVDTLE
FFKGNVSMSARALGIGRNTLYRKAKEYNINISN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgacacccagcatattggtcatcgatgatgagcagcctgtgggaacttttttt
accagattactggcgcaaaaaggttatcggattggcgttgctgtttccggaacacaggct
cacgcactaattgaccaggaacgctatgatgtggccatggttgatttaaaattaccggat
accgacgggatcaccttgttgcagcatataaaaaccgtacagccccattgtgaagtagtg
attatgacaggctacagcaccaccaggacagcggtaaaagccatccaattcggagccttt
gattatattgaaaaaccctttgacgacattaatctggtggagcagttaattgaaaaggcc
ttgaattacagtaaaaccgtagaaaagcccggagataaaacctttagctggacggacacc
gccgaacaatgtggttttcaggtgggccatactccaaagatgattaagctggtttccatg
gccgaaagaattgcttctaaagatattaatgtgttgatccatggagaaacgggcaccggc
aaggaagttttggccaaatttattcatatggccagcaaccggcacgataaacctttttta
gccatcaattgcggggcccttccggaaaatttgctggaaagtgatttatttggccatgag
aagggatcctttaccggggccaatgttcaaaggaaagggatttttgaactggccaacaac
ggaaccttatttctggatgaaatcggtgaagctagtttggccatccaggtgaagctgttg
cgggttttggagaccggggaatttttgcgggtgggcggcgaaaaaccggtaaaaaccaat
gtaagaattattgctgccaccaatgtggatcttgaggaagcagtggcgcataaaaccttc
cgggaagatttgttctaccggctggatgtggttcgttttgttttacctcccttgcgggag
cgcaaagaagacattgtctccctggtggaattttttattcagcgcttttgggattaccaa
acaggtcccaccccgacctttgcaccggcctgtatggatgccctgttaaactatcattgg
ccggggaatatccgggaactggccaacacggtggaacaggccctggccttatgtgatgat
aaagccgttttaccggaacatctctcccgtaaaataactggtgctacccctgccctggaa
aagaatgatcctgagggcggggaggacacacttccagatatcaatggtctttccggctgg
ttttgccaacaggaaaaacaactggataaaatggatgaagagagactggtgcatttatat
aaaagggttgaggaactgtaccgggctctgcaccgggttatgggaaaaaaaggggttact
tctgcttttcccatctccattcaagaaatggaagccagggccattgtagatactttggaa
ttctttaagggaaatgtcagtatgagtgcccgggccctgggaatcggacgaaacaccctt
taccgtaaggcaaaagaatacaatattaatatatccaattaa
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