Desulforamulus ruminis: Desru_2123
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Entry
Desru_2123 CDS
T01518
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dru
Desulforamulus ruminis
Pathway
dru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desru_2123
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dru02000
]
Desru_2123
Transporters [BR:
dru02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Desru_2123
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEG60374
UniProt:
F6DK60
LinkDB
All DBs
Position
complement(2134106..2135800)
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AA seq
564 aa
AA seq
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MTGFGQGGKGKFKVKKLPVLLLGLLFMMSLLTGCGGNEDKQGAGGGGEVEKIIRTAEGNV
PKLDPGVGSDYSSSVALCNLYDTLVFPNADGTLKPMLATHWETSPDGLTWTFDLRQGVKF
HNGEELTAEDVVFSMERMLKMGEGYAYLFTNVLEEAKVLEPYKVQFKLKKSFGPFLSSLV
RLYILDKSQVMANLKQPGPYGEMGDYGKEWLVSNDAGSGPFKVKEFKIQEYLYADRFADY
WGGWEQDAPESFKIIGTSAATTIRTLMTRQELEISDQWQTEESLKALSGIPGVEINSVFL
GSMFNIMLNTKKAPTDDIHFRKALAYAFDYKTVEERIFPGSKKAIGPVPFNLPGVASDLP
QYERNLEKAKEELAKSKYANQLDQYPVEIAWIADVPDEEKIALLFQTNAAELGIKVNIFK
TPWLSFTDQVVSPESTANANTVFVSPHYNEAGSMLESRYHSKSTGTWEQCEWLKDPNIDA
AIEDAIGTLDTQQRLAKYQAIQATLVDLCPTVWAFDQAEKRAYQTEYIYWPTAEDQKAGK
PVNTVMGYAYYFHDFKVFPDKKTK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtttcggacaaggaggaaaggggaagttcaaggtgaaaaaactacctgtttta
ctgttgggtttgcttttcatgatgtcattgttaacgggctgtggagggaatgaggacaag
cagggagccgggggcggcggtgaggtggaaaagatcatccgtaccgccgaaggcaacgtg
cccaagcttgatcccggcgtgggctcggactacagcagttccgtggccctgtgcaatctg
tacgataccctggtattcccaaacgccgatggaacgctgaaacccatgctggctacccac
tgggagacctctccggatggtctcacctggacctttgacctgagacaaggagtgaaattc
cacaacggtgaagaattaaccgccgaagatgttgttttctccatggagagaatgctgaaa
atgggagaaggttatgcctacctttttaccaatgtgctggaagaagccaaagtattggag
ccatacaaggtacaatttaagctgaagaaaagctttggacccttcctctcctccctggtg
cgcctttatattttggataaaagtcaggttatggccaacctgaagcagcccggaccctac
ggggaaatgggagactacggcaaggaatggctggtatccaatgatgccggcagcggtcct
tttaaggtaaaggaatttaaaattcaagaatatctctatgccgaccgctttgccgattat
tggggcggttgggagcaagacgcgccggaatcctttaaaattatcggcaccagcgccgcc
accaccattcgcaccttgatgacccgccaggaactggaaatcagcgaccagtggcagacc
gaagaatccttgaaagccttaagcggtattcccggagtagagattaactccgtattttta
ggaagcatgtttaatattatgctgaacaccaaaaaggcacctacggatgacattcacttc
cgtaaggcgctggcctacgcctttgattacaaaaccgtggaagagagaattttcccgggc
agcaaaaaagccattggaccggtgccctttaatctgcccggcgtagccagcgacctgccc
caatatgaacggaatttggaaaaagccaaggaagaactggctaaatccaaatatgccaac
caattggatcaatatcctgtggaaattgcctggattgccgatgtgccggatgaagaaaaa
attgccctgctgttccaaaccaatgccgcggagctgggcattaaagtgaacatttttaag
acgccctggctttcctttacggatcaggtggtcagcccggaaagcaccgccaatgccaat
accgtttttgtctcccctcattataatgaagccggttccatgctggaatcccgttatcac
tccaaatccaccggaacctgggaacaatgcgagtggttaaaggatccaaacattgatgca
gccattgaagatgccatcggtaccttggatacccagcagcggctggctaaataccaggcc
atccaggccaccctggtggatctctgccccaccgtgtgggcttttgaccaggcagaaaag
agagcttaccaaacggaatacatctactggcctacggcagaagatcaaaaggccggcaaa
ccggtgaacaccgtaatgggttatgcttactatttccatgattttaaagtttttcccgac
aaaaagacaaagtaa
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