Desulfovibrio subterraneus: LN040_05310
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Entry
LN040_05310 CDS
T08953
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00470
D-Amino acid metabolism
dsb01100
Metabolic pathways
dsb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LN040_05310 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LN040_05310 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsb01011
]
LN040_05310 (alr)
Enzymes [BR:
dsb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
LN040_05310 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
dsb01011
]
Precursor biosynthesis
Racemase
LN040_05310 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
WBF68524
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All DBs
Position
1145526..1146644
Genome browser
AA seq
372 aa
AA seq
DB search
MSISYNNITVRIHLDRIRANYELLSRKASAPIGVIKSDAYGHGLVPVAGTLAAAGARTLA
VGTVGEALKLRKGGFNGRIIALLGALSSEEACSCRIGRIVPFVFSLQHLRMLSDAASADA
PISVALKFDTGMARLGFCEEDIAGLLQALPGLPGIKVAIVASHFAVSDEPEKEDFTREQH
ETFLRITGALRSAGLTFEATIANSAAMLAYPETHHELQRPGIAIYGANPLHGTPNEHMGS
GLCPAMDVGTPILQVHALPKGRSISYGRTFVALRDMRVAITSVGYADAFSRGLSNRGVMM
VNGQRAPIVGRVCMQMTAVDVTDIPHVSSGDTAWILGGPGECPVTPEELAAAWGTITYEA
FCLLGLNPKTFE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatcctataataatattacggtccgcatccacctcgaccgcatacgcgccaac
tacgaacttttgagccgcaaagcgtccgctcccatcggggttatcaagtccgacgcatat
gggcacgggcttgttcccgttgcaggcacccttgctgcggcaggcgcccgcacccttgca
gtgggaacggtgggtgaggcgctcaaactgcgcaagggcggttttaatgggcggataatc
gccctgctcggcgcactctcgtccgaagaagcatgcagttgccgcatcgggcgtatcgtc
cccttcgtcttttcactgcagcacctccgcatgctctctgatgcggcctctgccgacgct
cccatatctgtggctctcaagttcgacaccggcatggcccgactcggcttctgcgaagaa
gacatagccgggctcctgcaggccctgcccggacttcccggcatcaaggttgccattgtc
gcttctcactttgccgtaagtgacgaacctgaaaaagaagacttcacccgcgaacagcac
gaaaccttcctgcgcatcacgggggcgctgcgctcggccggcctgaccttcgaagcgacc
atcgcaaactcggcagccatgcttgcctaccccgaaacgcaccatgagctgcaacgcccc
ggcatcgccatctatggtgccaacccgctgcacggaacacccaatgagcatatgggaagc
ggattgtgccccgcgatggatgtaggcacccccatattgcaggtgcatgccctgcccaaa
ggcaggagcataagctacgggcgtacttttgtggccctgcgggacatgcgggttgccatc
acctctgtaggctacgcagacgctttcagccgaggtctatccaacaggggagtcatgatg
gtgaacgggcagcgcgcgcccatagtcggccgcgtatgcatgcagatgaccgcagtggat
gttaccgacattcctcatgtctcctccggagacacagcgtggattctgggcggccccgga
gaatgtcccgtaacaccggaagagctggcagcggcatggggtaccattacctacgaggct
ttctgcctgctcggactcaacccgaaaacctttgagtga
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