Desulfovibrio subterraneus: LN040_05455
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Entry
LN040_05455 CDS
T08953
Name
(GenBank) PAS domain S-box protein
Organism
dsb
Desulfovibrio subterraneus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
Response_reg
PAS_4
SBP_bac_3
PAS
PAS_8
HisKA
PAS_3
DegV
Motif
Other DBs
NCBI-ProteinID:
WBF68552
LinkDB
All DBs
Position
complement(1176666..1180100)
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AA seq
1144 aa
AA seq
DB search
MIVDFRRKTLQVLILFILLILFVHLGQAVHIVVSGPVGRTENGMLLYSLLSPARAEIRPP
APEPLVVGIPELSPPDYVSLDVSSSGFAMECMAHIAESAGYSLIIRRYPDMNAVLQDLEA
GRIQAIPLLPVREPYKQFADFTTPLRSDSVGLFALSDSVFSSTSSDLQGRNVGVVRGGIA
LSIVRELSGTLVREASGVEQLLFMLLSGQVDAVIHPQAAVLFYARRMGLQDRIKMLDGRL
LKEQYAIAVGKGNESVKDRLGIQVELFVDSPSHRKLLAKWFADDGEARQPLSLEGVLVAL
GLLLLGGAAIWGHMYFRRVRQRRTAILRSLLNASENAILLVSAGGDCLLGNETADRLFGE
INYGAGQSGFGFLFGEDDRERRLRAISRVVDTGTPMDTLHEYGSRIYRLSMHPVPRQNGA
EAFVAVTFHDVTERNAREQLVSETLRNFQLMFEGAPAGMAVLNSNMTVASANPAMGRFLG
CSARELEGRLLRDLFSPEDAESTRLELHKLFAGETDRIQVERRFMHKSGVPLWASLNVVA
ERSDAGLIESLMVHLTDIHERKTSVERLRESEQRYRELFERASDVILLINLSSGRVEEFN
QAAVAVLGYSDTELETLDCSRLVVQGAEGDFAGLFDEGLAEGQLRRKDGSAMDVQAHTRI
LSAAGRRYALSIIRDVTGSREAEDCLNHARRAREQAEKATESFFGSIGEELRTPLQGIMG
MLQLLAETPLTDLQQHYVRMSQESGDGLMRFMEDLLEYARLTSALSTKAIDTESRDEASC
PFVIDDMLLDVVNAHAPRAARKGGKLSASIASVFPEMLVGNASRLRKIVSKMVEYSVEGT
TNAKICLELRQPAGESALLKLGTRMTEFVVSVAADDLAEWAECARKVVGGEVRILQCMGS
FGLALAGRFAVALGGSLSVEERDGAVELAMRVPLRWNPVDRSAERVRILAAQAVAEQTAE
GDSPEYPEQISGADAGGDAARYSPVRREEVAPLLKGVKIIVADDDSINRVVIGRWLELFG
GSVAYAEDGQSVATLLKSGRYDCLVLDLQMPGRNGLEVARAIRGGECGTEVSQMPIVALT
AFSGKENEEACFEAGMNAFLSKPLDLRKLSEVLARLLESGGVLSSEETKAITLSEGENRL
PRPH
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgactttcgcaggaaaactctacaggtgctcatcctgttcattctgctgatc
ctgtttgtccacttgggacaggcggtacatattgtcgtgtccggacccgtcggccgcaca
gaaaacggtatgctgctgtacagtctgctgtcgccggcacgggccgaaatacgccccccc
gcaccggagccgcttgtggtgggcattcccgagctctctccgccggactatgtatctctg
gatgtgtcctcatccggcttcgccatggaatgcatggcacatattgcagaatctgcagga
tattctctgattatccggcgatatccggacatgaatgcagtgctgcaagatcttgaggca
ggcagaattcaggcgatccccctgcttccggtcagggagccctacaaacagtttgccgat
ttcaccacgccgctgcggtccgattcggtgggattgttcgccttgtccgactctgttttt
tccagcacgtcaagtgatctgcaggggcgcaacgtcggcgttgtgcgcgggggtattgct
ttatccatagtgcgggagctctccggcacgctggtgcgggaggcatctggagtagagcag
cttctcttcatgctgctttccggtcaggtggatgccgtcattcatccgcaggctgcagtg
ttattttatgcaaggcgaatgggattgcaggatcgcatcaagatgctcgacgggcgcctt
ttgaaggagcagtacgccattgctgtgggaaaagggaacgaatctgtcaaggacaggctt
gggattcaggttgagctgttcgtggacagcccttcgcaccgcaagctgcttgcaaagtgg
tttgcggacgatggtgaagcacggcagccgctttcgctggaaggtgtgcttgtcgcgctg
gggcttctcctcctcggcggtgcagccatatggggacatatgtatttcaggcgggtgaga
cagaggcgtacggctatactgcgctcactcttgaacgcgtcggaaaacgccatattgctg
gtttcggccggaggtgattgtcttttgggtaacgagacggcggaccggcttttcggggag
attaactacggtgcaggacaatccggtttcgggttcctgttcggtgaagacgacagagaa
cgccggttacgtgctataagtcgtgtcgttgacaccggtacccccatggatactctgcac
gagtatggcagccgtatctacaggctttccatgcatcctgttccccgccagaacggggca
gaggcctttgtggctgttacctttcatgacgtaaccgagcgcaatgccagagagcagctg
gtgagcgagacgttgcgtaacttccagctgatgttcgaaggggctccggccggtatggcg
gtgctgaacagcaatatgaccgtggcatcggccaatccggccatgggccgtttcctcggc
tgttctgcacgggaactggaaggccggttgctgcgcgatctgttcagtccggaagatgcg
gaatccaccaggctggaactgcataaactctttgccggtgaaacagaccggatacaagtt
gaaagacggttcatgcacaagagcggggtgccgctctgggcttcactgaacgtcgtggcc
gagcgttcggatgcgggacttatcgaaagcctcatggtgcatctgacagacattcatgag
cgcaaaacttctgttgagcggttgcgtgagagcgagcagcggtacagggagttattcgag
cgggcatcagatgttatcctgctgattaacctgtcgtcgggaagggtggaggagttcaat
caggctgcggtggcagtgttaggctattcggataccgaactggaaacccttgattgttca
cgattggttgtacagggcgctgaaggggattttgcaggcctgtttgacgaagggcttgca
gaagggcagcttcgcaggaaagacggctccgccatggatgtacaggcgcatacgcgcata
ctgtccgccgcaggcaggcgatatgccctctctatcatccgggatgttaccggatcgcgc
gaggctgaagactgtctgaatcatgcccgccgtgcgagagaacaggcggaaaaagccact
gaatcgtttttcgggagtatcggcgaggaactgcgcactccgttgcagggcataatgggc
atgctccagttgctggcagagaccccgcttaccgacctgcagcagcactatgtgcgtatg
tcgcaggaatccggcgacgggcttatgcggtttatggaagatctgctggagtatgcccgt
cttacctcggccctttcaacaaaggccattgatacggaatcaagggatgaagcatcctgt
ccctttgtgattgacgacatgctgctggatgttgtgaacgcccatgcgccgagggcagcc
cgaaaaggtggaaaactatcggcttccatagcctcggtgttcccggaaatgcttgtgggc
aatgcctccagactgcgcaaaattgtttccaaaatggttgagtattctgtcgagggaacc
acaaacgcaaagatctgtctggaactcaggcagccggcaggagaatcggcattgctgaaa
ctcggcacgcgaatgactgaatttgtcgtaagcgtggcggcggatgaccttgctgaatgg
gcagagtgcgcacgaaaggtggtaggcggagaagttcgcatcttgcagtgcatgggcagt
ttcggactggctctggcaggccggtttgccgtggcgttggggggcagtctttctgtggag
gaacgagacggggcagtagagcttgccatgcgtgttccgctgcggtggaaccctgtggac
agatctgccgaacgggtgcggattctggcagctcaggctgtggcagagcagacggcggaa
ggggatagtccggaatatccggaacagatctccggtgctgatgcgggcggagatgctgcc
cgttattctcccgtcagaagggaagaggtggccccgcttcttaaaggtgtgaaaatcatc
gttgccgatgatgacagtattaaccgtgtggtcatcggccgctggctggaattgttcggc
ggcagtgtggcctatgcagaagacgggcagagcgttgccaccctgttgaaaagcggtcgg
tatgattgcctggtgctggatctgcagatgccggggcgtaacgggcttgaggtggccaga
gccatacgcggcggtgaatgcgggactgaagtctcgcaaatgcccattgtggcgctgacc
gctttttccggaaaggaaaatgaggaagcctgctttgaggccgggatgaacgccttctta
tccaagcctctggatctgcgtaaattgtccgaggtgctggccaggctgctggaaagcggc
ggggtgttatcgtctgaggagacaaaggcgattaccctgtccgaaggcgaaaacaggctt
ccgcgtccccactga
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