KEGG   Drosophila sechellia: 6617822
Entry
6617822           CDS       T01064                                 
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
dse  Drosophila sechellia
Pathway
dse03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dse00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    6617822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dse03019]
    6617822
Messenger RNA biogenesis [BR:dse03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     6617822
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     6617822
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 6617822
NCBI-ProteinID: XP_002042132
UniProt: B4IEH2
LinkDB
Position
2L:complement(12929208..12930064)
AA seq 246 aa
MAGKYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAK
GNQTESVINCQYSQATFSTAERKNRPRGDRKSLEFKMYLQQALSAAIKSELYPRSQIDIY
VEVLQDDGANYAVALNAATLALIDAGICLNEFIVACTASLSKSNIPLTDISQFEEVSGGP
KLTVAALPTAEKIAFLEMSERFHIDHLETVIETAMAGCREIRDILEAAVKEHLLHMGSAS
DFAKVG
NT seq 741 nt   +upstreamnt  +downstreamnt
atggctggtaaatacgatctgcttagcgagcagggcctccgtctggacggacgacgtcct
catgaacttcgccgcatcaagtgcaaacttggagtcttcgagcagcccgatggaagtgca
tacatggagcagggaaacaccaaggttctggctgccgtctatggaccccaccaggccaag
ggcaatcagacggagtccgtcatcaactgtcagtacagtcaggccaccttctctacggcg
gagcggaagaataggccgcgcggcgatcgcaaatctctggagttcaagatgtatctgcag
caggcgctaagtgctgccattaaatcagaactatatccccgctcccagatagacatatac
gtggaggtgctccaagatgacggcgccaactatgcggtggcccttaatgccgccacactg
gcactaattgatgcggggatctgcctcaacgagttcattgtcgcctgcaccgcctcactg
agcaaatcaaatatcccgctcacagacatctcccagttcgaggaggtatccggcggcccg
aagctgaccgtggctgccttgcccaccgccgagaagatcgcctttcttgagatgagcgag
cggttccacatcgatcacttggaaaccgtcatcgagactgctatggcgggttgccgcgaa
ataagggatattctggaggcagcagtcaaggagcaccttctgcacatgggcagtgcctct
gactttgcgaaagttggttga

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