Dinoroseobacter shibae: Dshi_0743
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Entry
Dshi_0743 CDS
T00612
Symbol
mcsS
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K03442
small conductance mechanosensitive channel
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_0743 (mcsS)
Transporters [BR:
dsh02000
]
Other transporters
Pores ion channels [TC:
1
]
Dshi_0743 (mcsS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
BON
MS_channel_1st_1
Motif
Other DBs
NCBI-ProteinID:
ABV92488
RoseoBase:
Dshi_0743
UniProt:
A8LQU5
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All DBs
Position
750674..752056
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AA seq
460 aa
AA seq
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MRLSRLLPCLVLLALILVDLRLPQAVAQTASAPAPSEEVVDTDQTVSVDAGIADTQIARR
LTEILETTGWYDDVTLRVEDGIVFLDGTVTTEQRRDWLRDLAAKTDGVVAIVNRLQLDQE
VQLTLDPIEAEMRALWDQAVAAAPSILAAVLILPLALLLSRLVGRLARWMLRGRVRSPFL
GDVLARLIALPVFLIGVYVVLQVAGLTQLALSLIGGAGIVGIVIGFAFRDIAENFLASLL
LSIRQPFHRNDVVRVGEHLGVVHSMNTRSTVLVSPEGNHIQIPNAQVFKTTIENYTTSAS
RRETFTVGVGYDVPISEVQDIILEVLRGHEAVVQDPEPMVLADSLGAATVNVMVYFWFDG
ARVSPIKLRSALIRRVKQALTEAGVSMPDEAREVIFPQGIPIHQADAPPTAAPAPPRPAP
AARETDVSEAEGDLQTDLVDLDAQMAAEVEGSGEENLLRG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgtcccgtctgctgccctgccttgttcttctggcgctgatcctcgtggatctc
cgcctcccccaggcggtggcccagaccgcatccgcgcccgcgccctcggaagaggtggtg
gacacagaccagaccgtgtccgtggatgcgggcattgccgatacgcagatcgcgcgccgc
ctgacggagatcctcgagaccaccggctggtatgacgacgtgaccctgcgcgtggaggac
ggcatcgtgttcctcgacggcaccgtgacgaccgaacaacggcgcgactggctgcgcgat
ctggccgccaagaccgacggggtggtggccatcgtcaaccggctgcaactggaccaggag
gtgcagctgaccctcgacccgatcgaggccgagatgcgcgcgctctgggaccaggcggtc
gcggcggccccgtcgatcctggcggcggtgctgatcctgccgctggcgctgctgctgtcg
cgccttgtcgggcgactggcgcgctggatgctgcgcgggcgcgtgcgctcgccctttctc
ggcgatgtgctcgcccgcctgatcgcgctgccggtcttcctgatcggggtctacgtggtg
ctccaggtggcgggcctgacccagctggcgctgtcgctgatcggcggcgcggggatcgtg
ggcatcgtcatcgggttcgccttccgcgacatcgccgagaacttcctcgcctcgctgctg
ctgtcgatccgccagcccttccaccgcaacgacgttgtccgcgtgggcgagcatctgggc
gtggtgcattcgatgaacacgcgctccaccgtgctggtctcgcccgagggcaaccatatc
cagatccccaatgcgcaggtcttcaagaccaccatcgaaaactacaccaccagcgcctcc
cggcgggagaccttcaccgtgggcgtgggctacgacgtgccgatctcggaggtgcaggac
atcattctggaggtgctgcgcgggcacgaggcggtggtgcaggaccccgagccgatggtc
ctggccgacagcctgggggcggcgacggtcaatgtcatggtctatttctggttcgacggg
gcgcgggtctcgccgatcaagctgcgctcggccctgatccgccgggtcaagcaggcgctg
accgaggccggcgtgtccatgcccgacgaggcccgcgaggtgatcttcccgcaaggcatt
ccgatccaccaggccgacgcgccccccaccgccgcccccgccccgccgcgcccggccccc
gcggcgcgggagaccgacgtgtcggaggccgaaggcgatctgcaaaccgacctcgtggac
cttgacgcccagatggcggcggaggtcgaaggcagcggcgaagagaacctgctgcgcggc
tga
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