Dinoroseobacter shibae: Dshi_0821
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Entry
Dshi_0821 CDS
T00612
Symbol
glyA2
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00260
Glycine, serine and threonine metabolism
dsh00460
Cyanoamino acid metabolism
dsh00630
Glyoxylate and dicarboxylate metabolism
dsh00670
One carbon pool by folate
dsh00680
Methane metabolism
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01120
Microbial metabolism in diverse environments
dsh01200
Carbon metabolism
dsh01230
Biosynthesis of amino acids
dsh01240
Biosynthesis of cofactors
Module
dsh_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Dshi_0821 (glyA2)
09102 Energy metabolism
00680 Methane metabolism
Dshi_0821 (glyA2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Dshi_0821 (glyA2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Dshi_0821 (glyA2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Dshi_0821 (glyA2)
Enzymes [BR:
dsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Dshi_0821 (glyA2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ABV92566
RoseoBase:
Dshi_0821
UniProt:
A8LRB6
LinkDB
All DBs
Position
complement(825519..826814)
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AA seq
431 aa
AA seq
DB search
MNAPHRDNGFFTESLATRDAELFGAITKELGRQRDEIELIASENIVSAAVMEAQGSVLTN
KYAEGYPGRRYYGGCQYVDIAEELAIDRARQLFGCAFANVQPNSGSQANQGVFTALLQPG
DTILGMSLDAGGHLTHGAKPNQSGKWFNAVQYGVRQDTLDVDYDQIAALAAEHKPKMIIA
GGSAIPRIIDFARIREIADSVGAWVLVDMAHFAGLVAAGHYPSPFPHAHVATTTTHKTLR
GPRGGMILTDDEALAKKFNSAIFPGIQGGPLMHVIAGKAVAFGEALRPEFKTYQAQVIEN
AQALADQLMQGGLDIVTGGTDTHVLLVDLRPKGVKGNATEKALGRAHITCNKNGIPFDTE
KPMITSGIRLGSPAGTTRGFGTPEFRQIADWIVRVVDGLAANGEDGNAEVEAAVRAEVLE
LCGRFPIYPNL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaccgcaccgcgacaatggcttcttcaccgaaagcctcgccacacgggatgcc
gaacttttcggcgccatcaccaaggagctgggccgtcagcgcgacgagatcgagctgatc
gcctcggagaacatcgtctcggccgcggtgatggaggcgcagggctcggtcctgaccaac
aaatacgccgaaggctacccggggcggcgatattacggcggctgccaatatgtcgacatc
gccgaagagctggcgatcgaccgcgccaggcagctcttcggctgcgccttcgccaatgtg
cagcccaattccggtagccaagccaaccagggcgtgttcaccgccctgctgcagccgggc
gacacgatcctgggcatgagcctcgatgcgggcgggcacctgacccacggggccaagccg
aaccagtccggcaagtggttcaacgcggtccagtacggggtgcgccaggatacgctggac
gtggattacgaccagatcgccgcactggctgccgagcacaagccgaagatgatcatcgcc
ggcggctcggccatcccgcggatcatcgacttcgcccggatccgcgagatcgccgacagc
gtcggcgcctgggtgctggtggacatggcccatttcgcggggctggtggcggcggggcat
tacccctcgccgttcccgcacgcccatgtggccaccaccacgacccacaagaccctgcgc
ggcccgcgcggcggcatgatcctgaccgatgacgaggcgctggcgaagaagttcaactcc
gccatcttcccgggcatccagggcgggccgctgatgcatgtgatcgcgggcaaggccgtg
gccttcggcgaggcgctgcgcccggaattcaagacctaccaggcccaggtgatcgagaac
gcccaggcgctggccgaccagctgatgcagggggggctcgacatcgtcaccggcgggacc
gatacccatgtcctgctcgtggacctgcggcccaagggcgtgaagggcaacgccacggaa
aaggcgctcgggcgcgcccatatcacctgcaacaagaacggcatcccgttcgacaccgaa
aagccgatgatcacctccggtatccggctcggctccccggcgggaacgacgcgcggcttc
ggcacgccggaattccgccagatcgcggactggatcgtgcgggtggtcgacgggctggcc
gcaaacggcgaggacggcaatgccgaggtcgaggccgccgtgcgcgccgaggtgctggag
ctgtgcgggcgcttcccgatctatcccaacctctga
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