Dinoroseobacter shibae: Dshi_1239
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Entry
Dshi_1239 CDS
T00612
Symbol
lacZ
Name
(GenBank) beta-galactosidase
KO
K12308
beta-galactosidase [EC:
3.2.1.23
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00052
Galactose metabolism
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Dshi_1239 (lacZ)
Enzymes [BR:
dsh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Dshi_1239 (lacZ)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_42
Glyco_hydro_42M
Glyco_hydro_35
Glyco_hydro_14
Motif
Other DBs
NCBI-ProteinID:
ABV92981
RoseoBase:
Dshi_1239
UniProt:
A8LIC7
LinkDB
All DBs
Position
complement(1285260..1287167)
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AA seq
635 aa
AA seq
DB search
MTRKLGVCYYPEHWPEDQWPRDAARMKDAGLTLVRIGEFAWSRLEPSPGDLRFDWLDRAI
SVLAEAGLEVVLGTPTATPPRWMLDRHPDMLAVDARGQPRKFGSRRHYCFSHPGYRAEAA
RIARLLGERYGRDPRIVAWQIDNEYGCHDTTLSYSDAARHGFRDWLAQRYQSTDALNRAW
GNVFWSMAYDRFDQIDLPNLTVTEPNPAHALAFRRYASDMVVAFNRAQVAALRPLTDAPL
IHNYMGRVTEFDHHAVGADLDIASWDSYPMGFLLDRVEAPADHKAAYLRQGDPDFQAFHH
DLYRGVGRDGRWWIMEQQPGPVNWAPWNPAPLPGMVRLWSHEAFAHGAEAVCFFRWRQAP
FAQEQMHAGLLRPDDSPAPGLEEAAALAADLPRLPDVSPSRAPVALVFDYPSQWAWEVQP
QGADFDYFALCFAMYRGLRKLGLSVDILPADPARLAGHDLILVPGLLHLSADMTAYLATT
QAQVLVGPRAGSKTPEMSIALPLGPNLQGLDATVTHVETLPPGAERALQRGGAAERWIEA
VETRAEILEETTEGAPVLIRTGRQHYLAAWPDPEAMGRILRDLCSRAGIQTTDMPEGVRQ
RVHGHHKLVVNYSSEMRVFENDALPPAGLVWKLIP
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgcaagctgggcgtctgctactaccccgagcattggcccgaagaccaatggccg
cgggacgccgcacgcatgaaggacgcgggcctcaccctcgtccggatcggggaattcgcc
tggtcccggctcgaaccctcccccggcgatctgcggttcgactggctcgaccgtgccatt
tccgttctggccgaggccgggctggaggtcgttctgggcacccccaccgccacaccgccg
cgctggatgctcgaccgccaccccgacatgctggccgtggacgcccgcggccagccgcgc
aagttcggctcccggcggcactactgcttcagccatcccggctaccgggccgaggccgcg
cgcatcgcccgcctgctgggggagcggtacggccgcgacccccgcatcgtggcctggcag
atcgacaacgaatacggctgccacgacacaacgctcagctattccgacgccgcccggcat
gggtttcgcgactggctcgcccaacgttatcagtccaccgacgcgctcaaccgcgcctgg
ggaaacgtgttctggtctatggcgtacgaccgcttcgaccagatcgacctgccgaacctg
accgtgaccgagccgaacccggcccatgcgctggccttccggcgctacgcatcggacatg
gtggtggccttcaaccgcgcgcaggtcgcggccctgcgccccctgacggacgcaccgctg
atccacaactacatgggccgggtgaccgagtttgatcaccacgcggtgggcgcggacctc
gatatcgccagttgggacagctacccgatgggctttttgctcgaccgggtcgaagcaccc
gccgatcacaaggcggcctatctccgccagggcgacccggatttccaggccttccaccac
gacctctatcgcggggtcggacgggacggccgctggtggatcatggaacagcaacccggc
ccggtgaactgggcgccctggaaccccgcccccctgcccggcatggtgcggctgtggtcc
cacgaagccttcgcccacggcgccgaggcggtctgctttttccgctggcgccaggccccc
ttcgcgcaggagcagatgcatgcgggccttctgcgccccgacgacagcccggccccaggg
ctggaggaggccgcggccctggccgcagacctcccccggcttcccgacgtgtcaccgagc
cgcgcccccgtggcgctcgtgttcgactacccctcccaatgggcgtgggaggtgcagccc
cagggcgcggatttcgactatttcgccctgtgctttgcgatgtatcgcgggctgcgcaag
ctcggcctctcggtcgacatcctgcccgcggacccggcacggctggcgggccatgacctg
atccttgttcccgggcttttgcacctgtcagccgacatgaccgcatatctcgcaacgacc
caggcgcaggtgctggtcggcccgcgcgcgggttccaagacgccggagatgtccatcgcc
ctgccgctcggccccaatctgcaagggctcgacgccaccgtgacccatgtcgaaaccctg
ccccccggcgccgaacgcgcgctgcaacgcggcggggccgccgaacgctggatcgaggcc
gtcgagacccgcgccgagatcctggaggaaaccaccgaaggcgcccccgtcctgatccgc
accggacggcaacactacctcgcggcctggccggacccggaggccatgggccgcatcctg
cgcgatctctgctcgcgcgcaggcatccagaccaccgacatgcccgaaggcgtccgccaa
cgcgtccacggccaccacaagctggtggtcaattattcctccgaaatgcgggttttcgaa
aacgatgccttgccccctgcgggtctggtgtggaaattgatcccatga
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