Dinoroseobacter shibae: Dshi_1996
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Entry
Dshi_1996 CDS
T00612
Symbol
xylA
Name
(GenBank) xylose isomerase
KO
K01805
xylose isomerase [EC:
5.3.1.5
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00040
Pentose and glucuronate interconversions
dsh00051
Fructose and mannose metabolism
dsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dshi_1996 (xylA)
00051 Fructose and mannose metabolism
Dshi_1996 (xylA)
Enzymes [BR:
dsh01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.5 xylose isomerase
Dshi_1996 (xylA)
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GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ABV93735
RoseoBase:
Dshi_1996
UniProt:
A8LP53
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Position
complement(2114512..2115816)
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AA seq
434 aa
AA seq
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MSDFFAGIPAVTYEGPEARSDFAFRHYNPDEMVMGKRMEDQLRFAVAWWHSFAWEGGDPF
GGPTFQRPWFGDTLDHARAKADAAFEMFRILNVPFYCFHDADIRPEGASFAETTANLEAM
VDYLGQKQEASGKRLLWGTANLFSHRRYMAGAATNPDPDVFAYAAATIKTCMDATHKLGG
ANYVLWGGREGYETLLNTDLGREREQAGRMLQMVVDYKHKIGFEGTILLEPKPQEPTKHQ
YDYDVATVFSFLSEFGLQDEVKMNIEQGHAILAGHSFEHELALAREFGILGSIDMNRNDY
QSGWDTDQFPNNIPEVALAYYEILRAGGFDTGGTNFDSKLRRQSLDPADLIAAHVAAMDV
CAAGLKAAARMLEDGELEQRREDRYAGWRAPSAEAMLNGGKLEDCFAHVMETGLDPQPVS
GGQERLEALVARYL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattttttcgcggggatccccgccgtcacctatgaaggccccgaggcccgcagc
gacttcgccttccggcactacaaccccgacgagatggtcatgggcaagcggatggaggat
cagctgcgcttcgccgtggcctggtggcattcctttgcttgggaagggggcgacccgttc
ggcggtccgaccttccagcgcccgtggttcggcgacaccctggatcatgcccgcgccaag
gccgatgcggcgttcgagatgttccgcatcctgaacgtgccgttctattgcttccacgac
gccgatatccgccccgagggcgcgagtttcgccgagaccaccgcgaaccttgaagcgatg
gtggactacctgggccagaagcaggaggcgagcggcaagcggctgctctggggcaccgcg
aacctgttctcgcaccggcgctacatggctggggcggcgacgaacccggacccggatgtg
ttcgcctatgccgccgccaccatcaagacctgcatggacgcgacccacaaactgggcggc
gcgaattatgtcctgtggggcgggcgcgaggggtacgagaccctgctcaacaccgatctg
gggcgcgagcgggagcaggcgggccggatgctgcagatggttgtggattacaagcacaag
atcgggttcgagggcacgatcctgctggagccgaaaccgcaggagcccacgaagcaccaa
tatgattacgacgtggccacggtgttcagctttctgtcggagttcggcctgcaggacgag
gtgaagatgaatatcgagcagggccatgcgatcctggccgggcattccttcgagcatgag
ctggcgctggcgcgggagttcgggatcctgggctccatcgacatgaaccgcaacgattac
cagtcgggctgggacaccgaccagttcccgaacaacatccccgaggtggcgctggcctat
tacgagatcctgcgcgcgggcggcttcgataccgggggcaccaatttcgattccaagctg
cggcggcaatcgctggacccggcggacctgatcgcggcccatgtggcggcgatggatgtc
tgtgccgcggggctgaaggcggcggcacggatgctggaggatggcgagttggagcagcgg
cgcgaggatcgctatgcgggctggcgcgcgccctcggcggaagcgatgctgaacggtggc
aagctggaggactgctttgcccatgtgatggagaccgggcttgatccgcagccggtctcg
ggcgggcaggaacggctggaggcgctggtcgcgcgatacctgtaa
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