Dinoroseobacter shibae: Dshi_2278
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Entry
Dshi_2278 CDS
T00612
Symbol
dmsA1
Name
(GenBank) dimethyl sulfoxide reductase precursor
KO
K07812
trimethylamine-N-oxide reductase (cytochrome c) [EC:
1.7.2.3
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00680
Methane metabolism
dsh01100
Metabolic pathways
dsh01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Dshi_2278 (dmsA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_2278 (dmsA1)
Enzymes [BR:
dsh01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.2 With a cytochrome as acceptor
1.7.2.3 trimethylamine-N-oxide reductase
Dshi_2278 (dmsA1)
Transporters [BR:
dsh02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
Dshi_2278 (dmsA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdopterin_N
Cytochrome_CBB3
CDC48_N
PUA_3
Motif
Other DBs
NCBI-ProteinID:
ABV94014
RoseoBase:
Dshi_2278
UniProt:
A8LR91
LinkDB
All DBs
Position
complement(2402247..2404919)
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AA seq
890 aa
AA seq
DB search
MSLTQPTRRAFIKGGAALFGSANLLGTTAFAALDPNSFDSRVFHATHYGPFEGVVRDGKL
VGLNTIMDIDARPTEMLTTGVIDRTYDKSRINYPMVRKSYLEGWETGDIKPELRGKEEYV
RVDWDTAWSLTAKALLDAATNHGNETIFSSSYGGWSNAGTFRPNVLQGRLMNLIGGCTVT
AGDWSAGASQVALPHIIGDMEVYSTQSAWETIRDNTEVFVLVGCDPIKNNRVEYRVADHG
MYAHWETIRDAGVKFISINPQKTASDDYLNAEWVKIVPNTDVALFCAMANHVLVMGLEDK
AYMDKYTVGSEKWVAYLKGETDGVEKTPEWAAQITGIAAEKIREMAELFAKSNTEIAGAW
SLQRAQHGEMTHWAIINFAALTGKIGKPGQGVGFSWHYGNGGMPASGKSNPAGLSQGRNF
VKTVCPASRITDMLENPGKEVFYNGNTHTYPDVKVVFNAGNNFMSHQQDTNRLIKALEKV
ETVVSVDVWWTAATRWCDIVLPAASTLEQDDISSGGTYSNDKVYAMKKVIEPVGESLPDY
EIFEGLADKLGLWMQFTDGEDKMYHIKLAYEKSSASAHTPFEEFWEKGFARQEVPEEARK
WTRHGDFYSDPEANPLHTTSGKIEMFCEDFAKLEIDDMPGMPIWMEKHEYLGNAKEGQLH
VVSPHPWFRLHSQMDQSENLRNLYKVQGREPVRINSEDAASRGIEDGDLVELYNDRGTVI
AGAVVSDEIMPGVVSIYEGAWPQLDSKGRCNSGLVNFLTSTQRSSGVAQATTANTTLCYM
RKCEDPEGPNMAYEKPPIIENYELAAIDEDKLGLDRIYDLTEKLLADLGPGEKIYFERCT
VCHAPREVTHFTQQQWRGITPSMFPRAGLEGDEAALVMDYLMENAADAPR
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcacgcaacccacccgccgcgcttttatcaagggcggtgccgcccttttcggc
agtgccaatctgttgggcacaacagcattcgccgcgctcgacccgaactcgttcgacagc
cgggtcttccatgcaacgcattatggcccgttcgagggcgttgtgcgcgatggcaagctc
gtgggtctgaataccataatggatatcgatgcccggccgaccgaaatgttgaccactggc
gtcatcgaccggacctatgacaagtctcgcatcaactacccgatggtgcgcaaatcctat
ctcgaaggttgggagaccggcgacatcaaacctgaactgcgtggcaaagaagaatatgtc
cgcgtcgattgggataccgcctggagcttgaccgccaaagcccttctcgacgcggcgacc
aaccatggcaacgagacgattttctcttcgtcctacggcggttggtccaacgcgggcacc
ttccgtcccaacgtgctgcagggtcggttgatgaacctgatcggcggttgcacagtgacg
gcaggtgactggtcggcgggggcgtcccaggtggcattgccgcatatcatcggcgacatg
gaagtctattccacgcaatccgcgtgggagaccatccgcgacaacaccgaggtattcgtg
ctggtgggctgtgacccgatcaagaacaaccgggtcgagtaccgcgtggccgaccacggg
atgtatgcgcattgggaaaccattcgcgatgccggcgtcaagttcatctcgatcaacccg
cagaaaacggcgtccgatgactatctcaatgccgaatgggtcaagatcgtgcccaacaca
gatgtggcgctgttctgtgccatggcgaaccatgttctggtgatgggcctcgaagacaag
gcctacatggataagtataccgttgggtccgagaagtgggtcgcctatctgaaaggagag
accgacggcgtcgagaagacacctgaatgggctgcgcagatcaccggcatcgccgctgag
aagatccgtgagatggcagagcttttcgcgaagtcaaacaccgaaatcgccggcgcctgg
tcgcttcaacgtgcccagcacggcgagatgacccactgggccataatcaacttcgcagcg
cttaccggcaagatcggcaaacccggccagggtgtgggcttcagctggcactatggcaac
ggcggtatgccggcctctggcaaatccaaccccgcaggactgtctcagggtcggaacttc
gtcaaaaccgtctgcccggccagccggatcaccgacatgctggagaaccccggcaaagag
gttttctacaacgggaacacccacacctatccggatgtgaaggtcgtcttcaacgcgggc
aacaacttcatgtctcaccagcaggacaccaaccggctgatcaaggcgctggagaaggtg
gaaaccgttgtcagtgtggacgtgtggtggactgcggcgacccgttggtgtgacatcgtt
ctgcctgcggcgtccaccctggaacaggacgatatcagctccggcggcacctattccaat
gacaaggtctacgcgatgaagaaggtcatcgagcctgtgggcgagagcctgccggactac
gaaatcttcgaagggttggctgacaagcttggcctctggatgcaattcactgatggtgaa
gacaagatgtatcacatcaagcttgcctacgagaaatccagcgcctctgcgcatacccca
ttcgaggagttctgggaaaagggattcgcccgtcaagaagtgcccgaagaggcccgcaaa
tggacccgtcacggtgatttctacagcgaccccgaagcaaacccactgcacacgacatcg
ggcaagatcgagatgttctgcgaagacttcgcgaaactcgagatcgatgacatgcccggc
atgccgatttggatggagaaacacgagtatcttggcaacgccaaggaaggccagttgcac
gttgtctcgccccacccgtggttccgcctgcacagccagatggaccagtcggaaaacttg
cgcaatctctacaaggtgcagggtcgcgaaccggtgcggatcaactccgaagatgccgcg
tcacgcggaatcgaggatggcgacttggtcgagctctacaacgatcggggcacagtcatt
gccggcgccgtagtcagcgatgagatcatgcccggagtcgtctcgatctacgagggggca
tggccgcagctcgacagcaagggtcggtgcaactcggggctggtcaacttccttacctcg
acgcagcggtcttcgggcgtcgcccaagcgaccacggcgaatacgactctgtgctacatg
cgcaaatgcgaggatcccgagggtccgaacatggcatatgaaaaacctccgatcatcgag
aattacgaactggctgcgatcgacgaggataagctgggcctcgatcggatctatgatctg
accgagaaactcctggcagatttggggcccggtgagaagatctacttcgaacgttgcacg
gtctgtcacgcgccgcgcgaagtgacccacttcacccagcagcaatggcgcggcatcacg
ccttcgatgttcccgcgtgccgggctggagggggacgaggcggccttggtcatggactat
ctgatggagaacgccgccgacgcgccgagataa
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