Dinoroseobacter shibae: Dshi_2378
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Entry
Dshi_2378 CDS
T00612
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00470
D-Amino acid metabolism
dsh01100
Metabolic pathways
dsh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dshi_2378 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Dshi_2378 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsh01011
]
Dshi_2378 (alr)
Enzymes [BR:
dsh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
Dshi_2378 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
dsh01011
]
Precursor biosynthesis
Racemase
Dshi_2378 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
ABV94114
RoseoBase:
Dshi_2378
UniProt:
A8LRT3
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All DBs
Position
2512525..2513574
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AA seq
349 aa
AA seq
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MATATLSIDLDAIAANWRALDRASNRRVATGAVVKADGYGLDAGRVARTLAQAGARQFFV
AVAEEGVTLRKALGPGPAINVFSGHMEGDTQAIAGARLTPMINSAEQLARHFEALPRHPF
GIQLDTGMNRLGMEADEWAAVAEFALGQGPKLVMSHLACADEPGHAANAAQLAEFHRLTD
GITVPRSLSATGGILLGEAYHFDMTRPGIGLYGGAPFGAAEPVVRLSIPVVQVRAVTAGE
SVGYGCSWVAQSDGAIATLSAGYADGLIRAMSNRAMLYAGDVACPLAGRVSMDLLTVDVS
HLDEVPEALDLLCPAQGVDRLAEAAGTIGYEILTSLGPRYARHYAGGVA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcaaccctctccatcgacctcgacgcaattgccgcgaactggcgcgcactg
gatcgtgcatccaaccgtcgggtggcgaccggcgccgtggtcaaggccgatggctacggg
ctcgatgcggggcgcgtcgcgcgcaccctcgcccaggccggggcacgccagttcttcgtg
gccgtcgccgaggaaggtgtcacgctccgcaaggctctcgggccgggcccggcgatcaac
gtcttctcggggcatatggagggcgacacccaggccatcgctggcgcacggctgaccccg
atgatcaactccgccgagcaactcgcccggcatttcgaggccctgccacgccatcccttc
ggcatccaactcgacacgggcatgaaccggctggggatggaggcggacgaatgggccgcg
gtggcggaattcgcgctggggcaagggccgaagctggtgatgtcccatctggcctgcgcc
gatgagcccgggcatgccgcgaacgccgcacagctggccgagtttcaccgcctcacggac
gggatcaccgtgccgcgcagcctgtcggccacgggcggcatccttctgggcgaggcgtat
catttcgacatgacccggcccggcatcgggctctatggcggcgcccccttcggcgcggcc
gagccggtggtgcgcctgtcgatcccggtggtgcaggtccgcgcggtcaccgcgggcgaa
agcgtgggctacgggtgttcctgggtggcgcaatcggacggggccatcgcgacgctctcg
gcgggctatgccgacgggttgatccgggcaatgagcaaccgcgccatgctctatgcgggc
gacgtggcttgcccgctggccgggcgcgtgtccatggacctgctcaccgtggatgtcagc
catctcgacgaggtgccggaggcgctcgatctgctgtgtcccgcgcaaggcgtggaccgt
ctggccgaggccgccggcacgatcggctatgaaatcctcacttcgctggggccccgctac
gcccggcactatgcgggcggcgtcgcatga
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