Dinoroseobacter shibae: Dshi_3117
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Entry
Dshi_3117 CDS
T00612
Name
(GenBank) hypothetical protein
KO
K07114
Ca-activated chloride channel homolog
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_3117
Transporters [BR:
dsh02000
]
Other transporters
Pores ion channels [TC:
1
]
Dshi_3117
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_16
TPR_1
BatA
Motif
Other DBs
NCBI-ProteinID:
ABV94850
RoseoBase:
Dshi_3117
UniProt:
A8LLA1
LinkDB
All DBs
Position
3283557..3285068
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AA seq
503 aa
AA seq
DB search
MSLLDAFHLIRPWALLALPVIALLWWRIRPKPQAATQATTGLAPHLAEALATGASRRRRL
YPIDGVAAALVLLTLAVSGPTWSRLPDPFQAETAPLVVVLKLTPSMTETDLSPTRLDRAR
FKILDLVARRAGAETALIAYAGSAHRVVPLTTDPGILTSFLNGLSPAVMPVDGDDPAAAL
SRATDELARAEAAGAILMVLDDMAPDAIPNIAAMDLPPITILAAAPDTVTLPQLDGLPGA
TVVRLSPDDSDLDRIERALVSAYRAAQSEDETQLWEDRGWWLAWPAALLVLIWFRRGWTM
RWAALAVLATGLSTPQTARADGIADWFWTPDQQGRRAFEARDYDRAAALFEDPMWRALAL
FRDGQYEAAAEAYATLDSPEAAFGEGMARLRNRKYRAGVRAFEHALELRPDYPEAAQNLE
VAQAIVALVESTQSQSDTGKETGIGADDVVMDNESGLGEQTEVERSGAGDGVQSAEEWMR
SVDTDVSDFLATRFRIESAEAPE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctcgacgccttccacctgatccgcccctgggcgttgctggccctgccggtg
atcgcgctgctgtggtggcgcatccggcccaagccccaggccgccacgcaggccaccacc
ggcctcgcgccgcacctggccgaagccctggcgaccggggcctcccggcggcggcggctt
tatccgatcgacggggtcgcggcggcgctggtccttctgacgctcgccgtctccgggccc
acctggtcgcgcctgcccgacccgtttcaggccgagaccgcgcccctggtggtggtgctg
aaactcaccccgtccatgaccgaaaccgacctgtcgcccacccggctcgaccgcgcccgg
ttcaagatcctcgacctggtggcccgccgcgcgggcgcggaaaccgcgctcatcgcctat
gccggcagcgcccaccgggtcgtgcccctgaccaccgatcccggcatcctgaccagcttt
ctcaacgggttgagcccggcggtgatgccggtggacggcgacgaccccgccgccgccctg
tcccgcgcgaccgatgaactcgcccgcgccgaggccgccggggcgatcctgatggtgctc
gacgacatggcccccgacgcgatcccgaacatcgccgcgatggacctgccgccgatcacg
atcctggccgccgcgcccgataccgtgaccctgccgcaactcgacgggctgcccggcgcg
accgtggttcgcctcagccccgacgacagcgatctcgaccggatcgaacgcgccctggtc
tctgcctaccgcgctgcgcaatccgaggatgagacacagctctgggaggatcgcggctgg
tggctcgcctggcccgcggccctcctcgtgctgatctggttccgccgcggctggaccatg
cggtgggcggcgctggcggtcctcgccacgggcctgtcgacgccgcaaaccgcccgggcc
gacggcatcgccgactggttctggactccggaccagcagggccgccgcgccttcgaggca
cgggactacgaccgcgcggccgcgctgttcgaagacccgatgtggcgcgcgctggcgctc
ttccgtgacggccaatacgaggccgcggccgaggcctacgccaccctcgacagccccgag
gccgccttcggcgagggcatggcccgcctgcgcaaccgcaaataccgcgccggtgtgcgc
gccttcgaacacgcactggagctgcgcccggactaccccgaagccgcacagaacctcgag
gtggcccaggccatcgtggcgctggtggaaagcacccagtcccagtccgacaccggcaag
gagaccggcatcggcgccgacgatgtggtcatggacaacgaaagcggcctcggcgagcag
accgaggtggaacgttccggcgcgggcgacggggtccagagcgccgaggaatggatgcgc
tccgtggacaccgatgtcagcgacttcctcgccacccgtttccgcatcgaatctgccgag
gccccggaatga
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