KEGG   Drosophila simulans: Dsimw501_GD20571
Entry
Dsimw501_GD20571  CDS       T01065                                 
Symbol
Dsim_GD20571
Name
(GenBank) uncharacterized protein
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
dsi  Drosophila simulans
Pathway
dsi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dsi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Dsimw501_GD20571 (Dsim_GD20571)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsi03400]
    Dsimw501_GD20571 (Dsim_GD20571)
Enzymes [BR:dsi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Dsimw501_GD20571 (Dsim_GD20571)
DNA repair and recombination proteins [BR:dsi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     Dsimw501_GD20571 (Dsim_GD20571)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: KMZ03998
FlyBase: FBgn0192039
LinkDB
Position
3R
AA seq 803 aa
MLLSRLTWQARFVTRLLCNKMASKGWHNEDNKLDTFRRICDEIAGESSYLKKAEKLQRFF
EKGSSGKGFKGDTLLWVQFLIPAANQRVYNLQNKALIKLFSRIFNADQQQMHLDLEQDGD
VSETLRKHFAASKKLKPQAQSKLYLQEVEEMLLKLVERTKEDEQTDLLQKLCSKATDLDL
RTFIRLVKHDLRINARARHILDAFGPDAYPTYQSSRDLVAIVGQFAGKENKKDASSAVKK
VKKTNSSGIQVMTPISPMLASPCKSVEEAFKKSPTGLYSEIKYDGERVQIHKQGNDFKFF
SRNLKPVVDHKIRDLKKYIPLAFPGGGKMILDSEIILVDTDTGALLPFGSLGAHKKQTFA
NAAVCLFVFDCILYDGEDLTQLPFRKRREILEQNIKPIKSHVQLSESEFLKTTRELATMT
ARVLHANLEGVVLKSPDSTYQPGKRNWLKVKKDYLFDGKMADTADLVVLGAWYGSGKKGG
TLSIFLMGCYDAFGRLWKTVTKVHSGLDDATNAEVHESLIKLTERADANAIPSWLLCSKS
LVPDVLAKDPMKMPVWEITGAEFTKSDAHTASGISIRFPRITRRRSDKSAKEANDLAHLE
DLFEASKSNVNVDLLLDSCSKDEKVIDNKTTPEKEKKLNGNQKKLKRSNTTGSDDEDGAP
VPSKRKESKALRSLSPSQKGLKDFFKPSKELKSVVKKEPKEEESVTQSTNSEGKLFEGLV
AHFAMEKDSSKLMQQFSQHGGCCTTETRKADLVFYTSTNEPLDLEKLRTLYRRSCQHLNV
TWLQISLDTQSRQPYPLYAVMMK
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgctattgtccaggctaacgtggcaggccaggtttgtaactcgtcttctgtgtaataag
atggccagcaagggatggcacaatgaggacaacaagttggacaccttccgtcgcatctgt
gatgaaattgccggcgagtcaagttacctgaagaaggcggagaaactgcagcgattcttc
gaaaaggggagcagtggcaagggcttcaagggcgacaccctgctctgggtgcagttcctc
attccggcggccaaccagcgcgtctacaatctgcagaacaaggcgctaatcaaactcttt
tcgcgcatttttaacgcagaccaacagcaaatgcatctggatctagagcaggatggagac
gtttcggaaactctacgcaagcactttgctgcttctaagaaactcaagccacaagcgcaa
agcaaactctatctgcaggaggtggaggagatgctcctgaagctggtggagcgtaccaaa
gaggatgagcaaacagatctgctacagaagttgtgctcgaaggccactgacctggatctg
cgcacatttattcgcttggtgaagcacgacttaagaatcaatgcccgggcccggcacatc
ctggatgcctttggtcctgatgcctaccccacatatcagtcttcccgcgatttggtggca
attgtcggacagtttgccggcaaagaaaataagaaggacgccagtagtgccgtcaagaag
gttaagaaaacgaactcgagtggaattcaggtaatgacgcccatatcgcccatgttggcc
agtccctgcaagtcggtggaggaggccttcaagaagagccccactggactgtatagcgag
atcaaatacgatggagagcgagttcaaatccacaagcagggcaacgacttcaagttcttt
agccgcaatctaaagcctgtggtggatcacaagatacgggatctgaaaaaatatattccg
ctagcctttcctggcggtggcaaaatgatactggactctgagatcattctggtcgacact
gatacgggagcactgctgccctttggttcgttgggtgcccataagaagcagactttcgcc
aatgctgcggtatgcttattcgtcttcgattgcatactgtacgatggcgaggatttgacc
cagctgccatttcgcaagcgtcgcgagatccttgagcagaatattaaacccattaaatcc
cacgtgcagctgtcggagtcggagttcctcaagaccacgagggaactggccacgatgacg
gctagggtgttacacgccaatctggagggtgtggtcctgaagagtccagacagcacatat
cagcccggcaaaaggaactggcttaaggtcaagaaggattacctattcgacggaaaaatg
gctgacaccgcggacttggttgttttgggcgcttggtacggatcagggaagaaaggtggc
acgcttagtattttcctcatgggctgttacgatgcgtttgggcgtttgtggaagacagtg
accaaagtgcactctggattggatgatgctaccaacgcagaggtacatgaatcactgatc
aaactaaccgaacgtgctgatgccaatgcaattcccagttggctgttgtgcagtaagtcc
cttgtaccagatgtactggccaaggatccgatgaaaatgccagtatgggagattactggc
gcagagttcaccaagtccgatgcgcataccgcgtctggaatctcaatacgatttcccagg
attactcgtcgtcgcagtgataagtcagccaaagaggccaatgatctggcccacttagaa
gatcttttcgaggcctcaaaatcgaatgtaaatgttgatttacttctggacagttgtagt
aaggatgagaaagtaattgataacaaaacaactcctgaaaaagagaaaaaactcaatggc
aatcaaaagaaactgaaaaggtccaatactactggttcagatgacgaagacggagctcct
gtgcccagcaaacgcaaggagtccaaagcgcttcgaagcttgtcgccttcgcaaaagggc
ttaaaggatttttttaagcccagcaaggagcttaaatcagttgtgaaaaaggaaccaaag
gaggaggaaagcgttacacaatccactaactcggaaggcaagttgttcgaaggattggtg
gcgcactttgccatggagaaggattcaagcaaactgatgcagcagttttcacagcatgga
ggatgctgtacaacggagacacgaaaagctgatctggtcttttatacaagtacgaacgag
ccattggaccttgagaagcttagaacgctgtatcgtcgtagctgccagcacttgaatgta
acgtggctccaaatctctctcgatactcagagtcgtcagccctatcccctatacgccgtg
atgatgaaatga

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