KEGG   Drosophila simulans: Dsimw501_GD19872
Entry
Dsimw501_GD19872  CDS       T01065                                 
Symbol
Dsim_GD19872
Name
(GenBank) uncharacterized protein
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
dsi  Drosophila simulans
Pathway
dsi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:dsi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Dsimw501_GD19872 (Dsim_GD19872)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dsi03021]
    Dsimw501_GD19872 (Dsim_GD19872)
Transcription machinery [BR:dsi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     Dsimw501_GD19872 (Dsim_GD19872)
SSDB
Motif
Pfam: TFIIF_alpha DUF3874
Other DBs
NCBI-ProteinID: KMZ01843
FlyBase: FBgn0191360
LinkDB
Position
3R
AA seq 577 aa
MSSASKSTPSAASGSSTSAAAAAAASVASGSASSSANVQEFKIRVPKMPKKHHVMRFNAT
LNVDFAQWRNVKLERENNMKEFRGMEEDQPKFGAGSEYNRDQREEARRKKFGIIARKYRP
EAQPWILKVGGKTGKKFKGIREGGVGENAAFYVFTHAPDGAIEAYPLTEWYNFQPIQRYK
SLSAEEAEQEFGRRKKVMNYFSLMLRKRLRGDEEEEQDPEEAKLIKAATKKSKELKITDM
DEWIDSEDESDSEDEEDKKKKEQEDSDDGKAKGKGKKGADKKKKKRDVDDEAFEESDDGD
EEGREMDYDTSSSEDEPDPEAKVDKDMKGVAEEDALRKLLTSDEEEDDEKKSDESDKEDA
DGEKKKKEKGKDEASKDKKKKKPSKDDKKGKSNGSGDSSTDFSSDSTDSEDDLSNGPPKK
KVVAKDKDKEKEKEKESAASSKATTSSSNANKSRSATPTLSTDASKRKMNSLPSDLTASD
TSNSPTSTPAKRPKNEISTSLPTSFSGGKVEDYGITEEAVRRYLKRKPLTATELLTKFKN
KKTPVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgtcgagcgcctcaaagtcgacgccgagcgctgccagcgggagctccacgtccgcagct
gctgccgccgcagcctccgtcgcctcaggatccgcctcgtcctccgccaacgtgcaggag
ttcaagatccgcgtacccaaaatgcccaaaaagcaccatgtgatgcggtttaatgccacg
ctcaatgtggatttcgcacagtggagaaatgtgaagctggagcgggagaacaacatgaag
gagttccggggcatggaggaggatcagcccaagttcggtgctgggtcggagtacaatagg
gatcagcgcgaagaggctcgccgcaagaagtttggcattatagcgagaaagtaccgtccg
gaggcgcagccttggatccttaaagtgggtggcaagactggaaagaagttcaaaggcatc
cgcgagggcggcgtaggcgagaatgccgctttctatgtgttcacccatgcaccagacggc
gccattgaggcataccccttgaccgagtggtacaacttccagcctattcagcgctacaaa
tccctgtcggcggaggaggccgaacaggaatttggtcggcgcaaaaaggtaatgaactac
ttctccctcatgttgcgaaagcgtctgcgcggcgatgaggaagaggagcaggatccggag
gaggccaagctaattaaggcagccaccaaaaaatccaaggagctcaagatcactgacatg
gatgaatggattgattccgaggatgagtcggattcggaggacgaggaggataaaaagaag
aaggagcaggaagacagcgacgatggcaaggccaagggaaagggcaagaagggagcagac
aagaaaaagaaaaagagggatgttgatgacgaggccttcgaggagtcggacgatggcgac
gaggagggcagggaaatggactacgacaccagctccagtgaagacgaaccagatccagag
gcaaaggtggacaaggacatgaaaggcgtggccgaggaagatgcgctccgcaagctactt
acctccgatgaagaggaggacgacgagaagaagtctgatgagtccgacaaggaggatgcc
gacggcgagaagaaaaagaaggagaagggcaaggacgaggcctccaaagacaaaaagaag
aagaaaccttcgaaggacgacaagaagggcaagtcgaacggcagcggtgactcgtccaca
gacttcagctctgacagcacagactccgaggacgacctcagcaacggaccgcccaagaag
aaggtcgtcgccaaggacaaagacaaggagaaggaaaaggagaaagagagcgctgcgagc
agcaaggccacaaccagcagcagcaatgccaacaagtctcgctcggccacgccaacgctc
tcgacggatgccagcaagcgcaagatgaacagcttgcccagcgatctcaccgcctcggac
acaagcaacagtcccaccagcacgccagcaaagaggcccaagaacgagattagcacatcg
ctgcccacttccttctctggcggcaaagtagaggactacggcatcaccgaggaggcggtg
cgtcggtatctcaagcgcaagcccctgaccgccaccgagttgctcaccaagttcaagaac
aagaagacgcccgtctccagcgaccgtttggtcgagaccatgacgaaaatcctgaagaag
atcaatcccgtcaagcacaccatacaggggaaaatgtatctctggatcaagtag

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