Dyadobacter sandarakinus: HWI92_13065
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Entry
HWI92_13065 CDS
T07768
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
dsn
Dyadobacter sandarakinus
Pathway
dsn00300
Lysine biosynthesis
dsn00470
D-Amino acid metabolism
dsn00550
Peptidoglycan biosynthesis
dsn01100
Metabolic pathways
dsn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HWI92_13065
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HWI92_13065
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HWI92_13065
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HWI92_13065
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsn01011
]
HWI92_13065
Enzymes [BR:
dsn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
HWI92_13065
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
HWI92_13065
Peptidoglycan biosynthesis and degradation proteins [BR:
dsn01011
]
Precursor biosynthesis
Amino acid ligase
HWI92_13065
Racemase
HWI92_13065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QRR01773
LinkDB
All DBs
Position
3232144..3234615
Genome browser
AA seq
823 aa
AA seq
DB search
MSITGYYPQTIATKATYLLTDSRQLSFPEQSIFFAIKGARHDGHQYVQELYDKGVREFVL
EEASWTAELQEQAAAWTDAELYVVPSAIRAMQQLVAQRRRSFHIPVVGIAGSNGKTIVKE
WLVQLLSPDQRIVASPKSYNSQIGVPLSVWNMGPEHTLGIFEAGISQAHEMEYLQPVMQP
TTGIFTNIGSAHNDGFRSNKQKITEKLRLFTKVRKLIYRKDYTQVDQEIVLILQPVNAFL
QALSWATATAADVTVRFEPDQTGATIALSGKLGVHRFHTGFKDEASLENLTHCIVFMLDF
GVKAEVISQRIALLKPVSMRLELKEGIHHSHIIDDTYNNDLQGLTMALNFLVQQEQHARK
TVILSDVLQTGQTPAELYRTIGKLLAEKGIHRIVGIGPEISSQQELFDIPFKEFYPGTDA
FLQSFNFSSISDNLVLVKGARPFSFEKIIHRLQQKAHGTVLEINLDALVHNLNFYRSQKA
SGTRVMVMVKAFAYGSGSTEVAALLQYHRVDYLGVAYADEGVALRQNGINLPVMVMNASP
STFDLLISYQLEPEIYSRQVLEEWIEYIGENKAGLNLPPIHLKLDTGMHRLGFVENDLDW
LEAKLESCPALKVASVFSHLVGADEGVHNEFSREQFAHFSRWTARLEKTLGYMPLRHILN
SAGIVRFPEYRMDMVRLGIGLYGVEATGREQDALQPVGTLKTIISQIKHLKAGETVGYSR
KGVLDHNAAIATIAIGYADGYDRRLGNGIGKVWVNGTPCPTVGNICMDMTMIDVTGVSAA
EGDEVIVFGKEMPITELAREIHTIPYEILTGIGDRVKRVFYKE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagcattacaggatactacccgcaaaccattgctaccaaggccacttacctgcttacc
gacagccgccagctttcttttcctgaacaaagcatttttttcgcgatcaaaggcgcccgt
catgacggacaccaatatgtgcaggaactgtatgacaaaggtgtgcgggagtttgtgctg
gaagaagcctcatggacagccgaattgcaggagcaggcagcagcctggaccgatgcggag
ctatatgtagtgccgtctgcaatccgggctatgcagcagctggtagcgcagcggcgccgg
agcttccatatcccggtggtcggaattgcgggaagtaatggtaaaacgattgtcaaagaa
tggcttgtgcagcttctatcccccgatcagcggatcgtggccagtccgaaaagctataat
tcgcagatcggcgtaccgctgtctgtctggaacatggggccggagcatacgctggggata
ttcgaggccgggatctctcaggcccatgaaatggaatacctgcaacctgtcatgcagcct
acgacaggtatttttaccaatatcggcagcgcccacaatgatggcttccgcagtaacaag
cagaaaatcaccgaaaaactgcgcctgtttaccaaagtacgcaagctcatttaccggaaa
gactatacccaggtagaccaggaaattgtgttgattttacagcctgtcaatgcatttctg
caggctttaagctgggctaccgctaccgcagccgacgtaaccgtgcgctttgaaccggat
caaaccggcgcgaccattgcactttcaggaaagcttggcgtgcaccggttccataccggt
ttcaaagacgaggcttcgctggaaaaccttacccactgcatcgtctttatgctcgatttc
ggagtgaaggccgaggtaatttcccagcgcattgcattgctgaagcccgtctccatgcgt
cttgaactgaaagagggcattcaccacagccacatcattgacgatacttataacaatgac
ctgcaggggctgaccatggcgctgaactttcttgtgcagcaggagcagcatgcgcggaaa
accgtcatcctgtcggacgtactgcaaaccgggcagacgccggcagagctgtaccggacc
attgggaagctactggccgaaaaaggaatccaccggattgtcgggatcgggccggagatc
agcagccagcaggagctttttgacattcctttcaaggaattttatccgggtacggacgca
tttctgcaaagcttcaacttttcgtctatatccgacaatctggtacttgtaaagggagca
cgtcctttttcatttgaaaaaatcattcaccggctccaacagaaagcgcatggtaccgtg
ctggaaatcaacctcgatgcactggtacataatcttaacttctaccgctcccaaaaggct
tccggcaccagggtgatggtaatggtcaaagcatttgcatatggcagcggcagtacggaa
gtggctgcattgctgcagtaccatcgggtagattacctgggtgtggcgtatgcagacgag
ggtgtggcacttcgccagaacgggattaacctgccagttatggttatgaatgcatcccct
tccaccttcgacctcctgatcagctaccagctcgaacctgaaatttacagccggcaggtg
ctggaagagtggattgagtacattggggagaacaaagcaggattgaatctccctccgata
cacctcaaactggacaccgggatgcaccggctcgggttcgtggaaaatgacctcgactgg
ctggaagccaagctagaaagctgccctgcattgaaggtggcatctgttttctcgcatctg
gtaggggcagacgaaggtgtgcacaatgaattttcgcgggagcagtttgcccatttcagc
cggtggactgcgcggcttgaaaaaacattgggctacatgcccctgcgccatattcttaat
tcggcaggcattgtgcgctttcccgaataccggatggatatggtacggctcggcatcggg
ttatatggtgtagaggctaccggccgcgagcaggatgcattgcaaccggtgggtacgctc
aaaaccattatctcgcaaatcaaacaccttaaagctggcgaaacggtaggttatagccgt
aaaggtgtgctcgatcataatgccgccattgctaccatcgccatcgggtatgccgacggc
tacgatcgccggcttggcaatggaatcgggaaggtgtgggtgaatggtacgccctgccct
accgtagggaacatctgcatggatatgaccatgattgatgttacaggcgtttctgctgcg
gaaggcgacgaagtaattgtattcggaaaagaaatgccgatcaccgagctggcccgggag
atccataccattccgtatgaaatcctgacggggatcggtgaccgggtaaaaagggtattt
tacaaagagtga
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