Dickeya solani IPO 2222: A4U42_08170
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Entry
A4U42_08170 CDS
T04410
Name
(GenBank) LysR family transcriptional regulator
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dso03000
]
A4U42_08170
Transcription factors [BR:
dso03000
]
Prokaryotic type
Helix-turn-helix
LysR family
A4U42_08170
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ANE75312
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Position
1949103..1950026
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AA seq
307 aa
AA seq
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MNLKQIRYFCAVVEAGSAVQAARELFIAPTAISMQIAQLEEHIGGPLLDRSRRPMELTML
GKYFYPRAKELLEHLHRLDEETHDIAIGKRGWLGVGFVRSTLFSTLPQTLRTFREAFPDV
HIDLLEVITDEQPAYLRDGRIHIGLSRFLGEVERPADLIHNLMFYDPFVAALPIDHPLAN
RSTISVAELHGEPFIIYPKDHMSAFGQKMLSLLREAGEETIVSYEVIEIHTALALVAAGL
GWTLVTRSISFNNRNDVAFIPISNVHAITRMVALTRAGEENALVNAFMSILVGHHENYYR
PTHSPPL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaagcaaataaggtatttttgcgcagtggtcgaagctggcagtgccgttcaa
gctgccagagagctatttatcgcacctacggcgatcagcatgcaaattgcgcagctcgaa
gaacatattggcggcccgctgctggatcgatccagaagaccgatggaactgaccatgctg
gggaaatatttctatccccgcgccaaagaattgctggaacatttgcaccgtctggatgag
gaaacccacgatatcgccatcggcaaacgaggctggctgggcgtcggttttgttcgttcc
acgctgttttccacattaccgcaaacattacgtacctttcgggaggcgttccccgatgtt
cacatcgacctgctcgaagttatcaccgacgagcaaccggcatacttgcgcgacggacgc
atccacatcggtctgtcccgctttctcggcgaagtcgagcgtcccgccgatctaatccat
aacctgatgttttacgatcccttcgtcgccgccctgccaattgaccaccctttggctaat
cgcagtaccatttcggtggcggaactgcacggcgaaccgttcatcatctatcctaaagat
catatgagtgcattcggccagaaaatgttgtcactactgcgggaagcaggggaagaaacc
atcgtctcttatgaggtcatcgaaatccacacggcacttgcgttggtcgccgccggcctg
ggatggacactagtcacacgttccatctcgttcaacaatcgtaatgacgtggcgtttatt
ccaatatccaatgttcatgcgatcacccgaatggtcgcactgacgcgggcaggagaggaa
aacgcactggttaatgcgtttatgtccattcttgtcgggcaccatgaaaactattaccgc
ccaacacattcgccaccactataa
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