Dickeya solani IPO 2222: A4U42_15000
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Entry
A4U42_15000 CDS
T04410
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00300
Lysine biosynthesis
dso01100
Metabolic pathways
dso01120
Microbial metabolism in diverse environments
dso01230
Biosynthesis of amino acids
Module
dso_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A4U42_15000
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dso01002
]
A4U42_15000
Enzymes [BR:
dso01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
A4U42_15000
Peptidases and inhibitors [BR:
dso01002
]
Metallo peptidases
Family M20
A4U42_15000
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
ANE76529
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All DBs
Position
complement(3477662..3478789)
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AA seq
375 aa
AA seq
DB search
MSCPVIELAQQLIKRPSLSPDDAGCQALMIERLQAIGFIIETLDFGDTQNFWAWRGQGKT
LAFAGHTDVVPVGNESQWQAPPFEPTIRDGMLYGRGAADMKGSLAAMVVAAERFVAAHPN
HQGRLAFLITSDEEASAVNGTVKVVETLMARQERLDYCLVGEPSSTVRVGDVVKNGRRGS
ITANLRIHGIQGHVAYPHLADNPVHRAMPALNELVATVWDQGNEFFPSTSMQIANINAGT
GSNNVIPGEMNVQFNFRFSTELTDELIKQQVKALLDRHQLNYTLEWQLSGHPFLTSRGEL
VDAVVNAVEHYSEITPQLLTTGGTSDGRFIARMGAQVVELGPINATIHKVNECVSAADLQ
LLSRMYQRIMEQLIA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgcccggtaattgaactggcccagcagctcatcaaacgcccgtccctcagcccg
gatgacgccggttgccaggcgctcatgattgaacgcctgcaagccatcggttttatcatc
gaaacgctggatttcggtgatacccagaacttctgggcctggcgtggtcagggaaagaca
ctggcgtttgccggtcacaccgatgtcgtgcctgttggtaatgaaagtcaatggcaggcc
ccgccgtttgaacccactattcgagacggtatgttgtacggccgcggcgcggcggacatg
aaaggttcgctggcggcaatggtagtggcggcggagcgttttgtcgcagcgcaccccaat
catcaggggcgactggcgtttcttatcacctccgacgaagaagccagcgccgtcaacggc
accgtcaaggtcgtggaaacgctgatggcgcgtcaggaacggctggactactgcctggtc
ggcgaaccgtccagtaccgttcgggtcggcgatgtggtgaaaaacggccgtcgcggttcg
attaccgccaatctgcggattcacggcattcagggccatgttgcttacccgcatctggcg
gacaacccggtgcatcgagccatgccggcgttgaatgaactggtggcgaccgtctgggac
cagggcaacgaattcttcccctccaccagcatgcagatagccaacatcaacgcaggcacc
ggcagtaataacgtgattcctggcgagatgaacgtgcaattcaatttccgctttagcact
gagctgaccgatgagctaattaaacaacaggtcaaagccctgcttgatcgccatcagctt
aactacacgctggagtggcagttatccggtcatccgttcctgaccagccgcggcgaactg
gtggatgcggtagtcaacgccgttgaacactacagtgaaatcactccgcagctcctgact
accggtggaacctcggatggccgctttattgcccgcatgggcgcacaggtggtggaattg
gggccgatcaacgcgaccatccataaagtgaacgagtgcgtcagcgccgccgacctgcaa
ctgctgagccgaatgtatcaacgcattatggagcaattgatcgcatga
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