Dickeya solani IPO 2222: A4U42_15350
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Entry
A4U42_15350 CDS
T04410
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00020
Citrate cycle (TCA cycle)
dso00785
Lipoic acid metabolism
dso01100
Metabolic pathways
dso01110
Biosynthesis of secondary metabolites
dso01120
Microbial metabolism in diverse environments
dso01200
Carbon metabolism
dso01210
2-Oxocarboxylic acid metabolism
Module
dso_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dso_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A4U42_15350
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
A4U42_15350
Enzymes [BR:
dso01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
A4U42_15350
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
ANE76591
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All DBs
Position
3546564..3549371
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AA seq
935 aa
AA seq
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MQNGAMKAWLDSSYLAGANQSYIEQLYEDFLTDPDSIDHSWRSIFQQLPTTGVKPDQLHS
KTRDYFRRLAKDASRYTSSITDPDSDAKQVKVLQLINAFRFRGHQHASLDPLGLWKQEHV
PDLDLTYHNLTDDDLKESFNVGSFAIGKETMPLGELYTALRQTYCGSIGSEYMHITNTEE
KRWIQQRIESVVGQPSFTVAERKRFLKELTAAEGLERYLGAKFPGAKRFSLEGGDALIPM
LKEIIRHAGKNGTREVVMGMAHRGRLNVLVNVMGKKTQDLFDEFSGKHKDHLGTGDVKYH
QGFSSDMETEGGKVHLALAFNPSHLEIVSPVVIGSVRARIDRLDNPNSSLVLPITIHGDA
AIAGQGVVQETLNMSKARGYEVGGTIRIVINNQIGFTTSNPHDARSTEYCTDIGKMVQAP
IFHVNADDPEAVAFVTRLALDFRNTFQRDVFIDLVCYRRHGHNEADEPSATQPVMYQKIK
KHPTPRKIYADRLEQQQMATLEDATELVNLYRDALDAGECVVDEWRPMDMHSFTWMSYLN
HEWDEPYPHKVETKRLQELAHRISEVPEALEMQPRVAKVYSDRAEMAAGEKRFDWGGAET
LAYATLVDEGIPVRLSGEDAGRGTFFHRHAVVHNQKGGSTYTPLAYVHNAQGVFNVWDSV
LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCIPSTPAQVYHMLRRQALRGMRRPLVVMSP
KSLLRHPLATSSLDELANGQFQPAIGEIDELDPKAVKRVVLCSGKVYYDLLEQRRKNEQK
DVAIVRIEQLYPFPHQAVQAALEPFAHVHDFVWCQEEPLNQGAWYCSQHHLREVIPFGAS
LRYAGRPASASPAVGYMSVHQKQQQALVDDALNVN
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacggcgcaatgaaggcctggctggattcctcctatctggcgggcgcgaaccag
tcctacatagagcagctctatgaagattttttaactgacccggattctatcgatcacagt
tggcgttcgatttttcaacaacttcctaccactggggttaaaccggatcaacttcactcc
aaaacgcgcgactatttccgccgcctggcgaaagacgcgtcgcgttacacttcttctatt
accgatcctgacagcgatgccaagcaggtcaaagtattgcagctgattaacgcttttcgt
ttccgtggtcatcagcatgccagtcttgatccgctgggtttgtggaaacaggaacacgta
ccggatctggatctgacctatcacaacctgactgatgacgatctgaaagagagttttaat
gttggctcgttcgccatcggcaaggaaaccatgccgcttggtgagttgtacacggcgctc
aggcagacttattgcggctcgattggttcggaatacatgcacatcaccaataccgaagaa
aaacgctggattcagcagcggattgagtcggtggtggggcagccgagttttaccgtcgca
gaaagaaaacgtttcctgaaagagttgaccgctgccgaagggctggagcgctatcttggc
gccaagttccccggcgccaagcgcttctcgctggaagggggcgatgcgctgatcccgatg
ctgaaggaaatcatccgtcacgcaggtaaaaacggtacgcgcgaagtggtgatggggatg
gctcaccgtggtcgtctcaatgtgctggtgaacgtgatggggaaaaaaacccaggatctg
ttcgacgagttttccggcaagcataaagatcacctcggcaccggcgacgtgaaataccat
cagggtttttcgtccgatatggaaaccgaaggtggcaaggtccatctggcgctggcgttc
aacccgtcgcacctggaaatcgttagcccggtggtgattggatcggtacgcgcgcgtatc
gatcgcctggataatcccaacagttcactggtgttgccgatcactattcacggcgatgcg
gcgattgccggtcagggcgtggtgcaggaaaccctgaacatgtccaaggcccgcggctat
gaagtgggcggtactatccgcatcgtcatcaataaccagatcggttttaccacctccaat
ccgcacgatgcccgttccaccgaatactgtaccgacatcggtaagatggtgcaggcgccg
attttccacgtcaacgccgacgacccggaagcggtggcgttcgttacccgtctggcgctg
gatttccgcaatactttccagcgcgatgtgttcattgatctggtgtgctaccgccgtcac
ggccataacgaagccgatgagccgagcgctacccagccggtgatgtaccagaagatcaag
aagcacccgacgccgcgtaaaatttacgccgaccgtctggagcagcagcagatggcgacg
ctggaagacgccaccgagctggtcaatctttaccgcgacgcgctggatgccggcgaatgc
gtggtagacgagtggcgcccgatggatatgcactccttcacctggatgtcttatctcaac
catgagtgggatgaaccttatccgcacaaggttgaaaccaaacgtctgcaggaactggcg
catcggatcagcgaagtgcctgaagcgctggaaatgcaaccgcgtgtcgccaaagtttat
agcgaccgcgctgaaatggcggcgggtgaaaaacggttcgactggggtggggcggaaacc
ttggcttacgccacgctggtagacgagggtattccggtgcgtctgtccggtgaggatgcc
gggcgcggcaccttcttccaccgtcatgcggtggtgcacaaccagaaaggcggctccact
tacacgccgctggcgtatgtgcataacgcgcaaggtgtgttcaatgtctgggattcggtg
ctgtctgaagaagcggtactggcgttcgaatacggttatgccactgccgaaccgcgcaca
ctgactatctgggaagcccagttcggcgatttcgccaacggcgcacaggtggtgattgac
cagttcatcagttccggcgagcagaagtggggccgtatgtgcggtctggtgatgttgctg
ccgcacggctacgaaggtcaggggccggagcactcctccgcgcgtctggagcgttatctg
cagttgtgcgccgagcagaacatgcaggtctgcattccgtccacgccggcgcaggtgtac
cacatgttgcgtcgccaggcgctgcgtggcatgcgccgcccgctggtggtgatgtcgccg
aaatcgctgctgcgccatccactggccacctcctcgctggatgaactggcgaacggtcag
ttccagccggcgattggggaaattgacgagctggatccgaaagcagtgaagcgcgtcgtg
ctgtgctccggcaaggtttactatgatttactggaacaacgtcgcaagaacgaacagaaa
gatgtggcgatagtgcgtatcgaacagctgtatccgttcccgcatcaggccgtccaggcc
gcgctggagccgttcgctcacgtacatgattttgtctggtgccaggaagagccgctgaac
cagggggcgtggtactgcagccagcaccaccttcgtgaggtcattccttttggtgcctcg
ttgcggtatgccggtcgtccggcctctgcttcacccgccgtcggctatatgtccgtacac
cagaaacaacaacaagctctggttgatgacgcgctgaacgttaattaa
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