Dipodomys spectabilis (banner-tailed kangaroo rat): 122097614
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Entry
122097614 CDS
T07891
Symbol
Vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122097614 (Vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122097614 (Vps8)
Membrane trafficking [BR:
dsp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122097614 (Vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps8
Clathrin
zf-RING_11
HOIP-UBA
zf-C3H2C3
zf-RING_5
zf-RING_2
zf-RING_UBOX
PHD
ANAPC4_WD40
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
122097614
NCBI-ProteinID:
XP_042524154
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MENEPDYENAEQSLCAKTAEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEEESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGVSAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
AGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDTVPVIVDYCLLLQRKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQIVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKALSDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEVYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWKK
AMDHIEELVALKPCKAADLVATHFSAQIETVIQKLQNQVLLFKFLRSLLDPREGIHANQE
SLQISPSVTEQFIELLCQFKPHQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
DIHGAFLIMLERLQSKLQEITHQGESTEEDSSLKDVEGTIVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSSSATPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSV
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTIEIEGQMRWTCYKCSSSNKVGKLSE
NSSEVKPGRITPSQVKVSPSYHQSKGDPPVKKVTSEPVLDPQQIQSFDQLCRLYRGSSRL
ALLTELAQNRGSDSCRPFSGSQSSPAFNSVFQKENFQLRLIPPPVTED
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagactatgagaatgcggaacagagcctctgtgccaagactgctgaa
gaagaactgaataagtctttcaatctagaagcttcactttcaaaattctcttacatagat
ttggacaaggaactggaattcaaaaatgatttgattgatgacaaggagtttgatattcct
caagttgatactcctccaactctggaaagcatactaaatgagactgatgatgaagaagaa
tcttttgttcttgaggatcctacactgctaaacattgatactattgattctcactcctat
gatacttcatctgtggcaagttcagatagcggtgacaggaccaatttaaaaaggaagaaa
aaattacctgattctttttcactccatggatcagttatgcgacattcacttctaaaggga
gtttctgcccagatagtgtctgcagctgacaaagtagatgctggcttgcctacagcaatt
gcagtgtccagtttgatagcagtgggtacatctcatggattggccttaatatttggaaaa
gaccagaatcaagcattgcggctctgcttgggtagcactagtgttggagctcagtatggt
gccatctctgcccttagcatcaacaatgactgctccagacttctttgtgggtttgctaaa
ggccagatcaccatgtgggatttggccagtggaaaacttctcagatcaataacagatgct
catcctccaggaacagcaatattgcatatcaagttcacagatgatccaactcttgcgatt
tgcaacgacagcggagggtctgtttttgaattgacatttaagagagtgatgggagtgagg
acctgtgaatctagatgtctcttcagtggctctaagggtgaagtgtgctgcattgaacct
ctacattccaagcctgaattgaaagatcatcccatcacacagttttcattattggccatg
gcatccttaacaaagatactggtcattggattgaaaccatccttgaaagtgtggatgact
tttccctatggacggatggatccctccagtgttccattgctggcctggcactttgtggca
gtgcataattatgtgaaccccatgcttgcattctgcagaggtgatgttgttcattttctg
ttggttaagagagatgaatctggagcaatacatgttactaagcaaaagcaccttcacctg
tactatgaccttatcaactttacttggataaactctcgcacagttgtgctcctagacagt
gtggagaagctgcatgtgatcgatcggcagacacaggaggaactagaaacagtggaaatc
tcagaggttcagttggtctataatagcagccactttaagtcacttgccaccggaggaaat
gttagccaggccctggctttggttggagagaaggcttgttaccaatccatcagtagctat
gctggtcagatcttttatttggggacaaaatctgtttatgtgatgatgctgaggagttgg
agagagagagtggatcatctcctgaaacaagattgtcttacagaagccttggctctggca
tggtcttttcatgaaggaaaagccaaagcagtggtggggctatcaggggatgccagtaaa
cgaaaggctgttgttgctgatcggatggtcgaaatcctattccattatgcagatagagct
ctgaaaaagtgcccagaccaaggaaagattcaagtaatggagcagcatttccaggataca
gtgcctgtcatcgtggattactgcctgctgctgcagcgaaaggatcttttatttagccaa
atgtatgacaaattaagtgagaattcagtggccaaaggagtgtttttggagtgccttgaa
ccatatattttaagtgataaattggtggggatcacaccccaggtcatgaaagacttaatt
gttcatttccaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggat
atcaccagcctagacattcagcagatagttctcatgtgctgggaaaatcgtctctatgat
gctatgatctatgtctacaacagaggcatgaatgaatttattagtcccatggagaaactt
ttcagagtcattgctcctcctctgaatgcaggaaaagcgctatcagatgagcaagttgtc
atgggcaataagcttcttgtatatattagctgctgtctggcaggtcgtgcatatcccctt
ggtgacatccctgaagatcttgtccccttggttaaaaaccaggtttttgaatttttgatt
cgcctgcattcagcagaagcatctcctgaggaagaagtctatccttacgtccggactttg
ctacattttgacacaagggaatttctgaatgtattggcactgacctttgaagattttaaa
aatgacaagcaagctgtggaataccagcagcgaattgtggatattttgttgaaagttatg
gtggagaattcagatttcactccctcacaagtaggatgtctctttactttcctggcacgg
cagcttgcaaagcctgacaataccttgtttgtgaacagaaccctctttgatcaggttctt
gaattcctctgtagtcctgatgatgactccaggcactctgagagacagcaggtcctttta
gaattgctgcaggctggaggcatagttcaatttgaagagagccgactcatccgcatggca
gaaaaagctgagttctaccaaatttgtgaatttatgtatgaacgtgaacaccaatatgac
aaaattattgattgctacttgcgtgacccattgagagaggaagaagtctttaattacatt
cacaacatcttgtccattcctggccacagcgctgaggagaagcagtctgtgtggaagaaa
gcaatggatcatattgaggaacttgtggctctgaagccctgtaaggctgcagatttggtt
gcgacccacttttctgcacagattgaaaccgtcattcaaaaacttcagaaccaagtttta
cttttcaaatttttgaggagtcttcttgatccaagggaaggtattcatgcaaatcaagag
tcactacaaatatctcccagtgttacagagcagttcattgaactattgtgtcagtttaag
ccacaccaagttatagagacacttcaagtccttgagtgctaccggctggaagaaactatt
cagattactcagaagtatcagctccatgaagtcactgcttatctattggaaaagaaagga
gatattcatggtgctttcttgataatgctagagagactacaaagcaaacttcaagagata
acacatcaaggtgaaagtactgaagaagattcttcactgaaggatgttgaaggtaccatt
gtagagacgattgcactttgccaaagaaattcccataatttgaaccagcagcaacgagag
gcactctggtttccattgttggaagcaatgatggccccacagaagctgtccagctcagcc
acccctcatctccactccgaagctctgaaatctttgaccatgcaagttctcaatagcatg
gcagcatttattgctcttccatcaatcttgcaaagaatcttacaggacccagtttatgga
aaaggaaaacttggagaaatccagggacttattctgggaatgttagacacctttaactat
gaacaaactctactagaaacaacaaccagccttctaaaccaagatctccactggtcattg
tgtaacctgagagcttcggtcacaagagggctgaatcctaaacaggattattgctccgta
tgtctgcagcagtacaagagacgccaagaaatggctgatgaaattattgtctttagctgt
ggccatttgtatcattcattctgtctacaaaacaaagaatgcaccatagaaatcgaaggc
caaatgagatggacatgctacaaatgcagctcaagtaacaaagtaggaaagctaagtgaa
aattcatctgaagttaaaccaggaagaataaccccatcacaggtgaaggtgtctccatca
tatcatcagtccaaaggagaccctcctgttaagaaggtaacctcagaacctgttctggat
ccacagcaaatccagtcatttgatcagctttgccggctctaccgaggaagctcccggctg
gctctccttactgaactcgcccagaaccgcggcagtgacagctgcaggccgttcagtggc
tcccagagtagccctgctttcaacagcgtcttccagaaggagaacttccagctgcggctc
atccccccacccgtgacggaggactga
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integrated database retrieval system
