Dipodomys spectabilis (banner-tailed kangaroo rat): 122110317
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Entry
122110317 CDS
T07891
Symbol
Vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04140
Autophagy - animal
dsp04148
Efferocytosis
dsp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122110317 (Vps11)
04148 Efferocytosis
122110317 (Vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122110317 (Vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122110317 (Vps11)
Membrane trafficking [BR:
dsp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122110317 (Vps11)
Hops complex
122110317 (Vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
TPR_11
DLP_helical
zf-RING_11
zf-HC5HC2H
zf-C3HC4_3
zf-RING-like
zf-ANAPC11
DUF5847
Motif
Other DBs
NCBI-GeneID:
122110317
NCBI-ProteinID:
XP_042538793
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MAAYLQWRRFVFFDKELVKEPLGNDGAAPGAAPAPGLPASKLLCLPPGITVCDSGRGSLV
FGDMEGQIWFLLRSLQLTGFQAYKLRVTHLYQLKQHNILASVGEDEEGINPLVKIWNLEK
RDGGNPLCTRIFSAIPGTEPTVVSCLTVHENLNFMAIGFTDGSVTLNKGDITRDRHSKSQ
ILHKGNYPVTGLAFRQAGKTTHLFVVTTENVQSYIVSGKEYPRVELDTHGCGLRCSALSD
PSQDLQFIVAGDECVYLYQPDERGPCFAFEGHKLIAHWFRGYLVIVSRDRKVSPKSDFTS
RDSQSSDKQILNIYDLCNKFIAYSAVFEDVVDVLAEWGSLYVLTRDGRVHALQEKDTQTK
LEMLFKKNLFEMAINLAKSQHLDSDGLAQIFMQYGDHLYSKGNHDGAVQQYIRTIGKLEP
SYVIRKFLDAQRIHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTKSES
EVHFDVETAIKVLRQAGYYSHALYLAENHAHHEWYLKIQLEDIKNYQEALRYIGKLPFEQ
AESNMKRYGKTLMHHIPEQTTQLLKGLCTDYRPSLEGRGDREAPSCQANSEEFIPIFANN
PRELKAFLEHMSEVQPDSPQGIYDTLLELRLQNWAHEKEPQAKEKLHAEAISLLKSGRFC
DVFDKALVLCQMHDFQDGVLYLYEQGKLFQQIMHYHMQHEQYRQVITVCERHGEQDPSLW
EQALSYFARKEEDCKEYVAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIRDYLVQKLQ
KQSQQIAQDELRVRRYREETSRIRQEIQELKASPKIFQKTKCSICNSALELPSVHFLCGH
SFHQHCFESYSESDADCPTCLPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDSFSVIAD
YFGRGVFNKLTLLTDPPTARLTPNLEAGLQRDLLMHSRRGT
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctacctgcagtggcggcgcttcgtcttcttcgacaaggagctggtgaaggag
ccgctgggtaacgatggggctgctcccggcgccgcgcctgcccccggactgcccgcctcc
aagctcctgtgcctccctccgggcatcactgtctgcgactcggggcgggggagcctggtc
tttggcgatatggaaggccagatctggttcttgctgcgttccctacagcttacgggcttc
caggcctacaaactacgagtgacacacctatatcaactgaagcagcacaatattctagca
tctgttggtgaggatgaagagggtattaaccccctggtaaagatctggaacttggagaag
agagatggcggcaacccactctgtactcgaatcttctctgccatcccaggaacagaacca
actgttgtgtcttgtttgaccgttcatgaaaatctcaactttatggccattggtttcaca
gatggcagtgttacattgaacaaaggagacatcacccgggatcggcatagtaagagccag
attttgcacaaaggcaactatcctgttacgggactggccttccgtcaagcaggaaagacc
actcacttgtttgttgtgacaactgagaatgtccagtcctatatagtttctggaaaggag
tacccgcgagtggagttggacacccacggttgtgggctacggtgctcagccctgagtgac
ccttctcaggacctgcagttcattgtggccggggatgagtgtgtctacctataccaacct
gatgaacgagggccctgcttcgcctttgagggccataagctcattgcccactggtttaga
ggataccttgtcattgtctcccgtgaccggaaggtttctcccaaatcagactttaccagc
agggactcacagagttctgacaagcagattctcaacatctatgatctgtgcaacaagttc
atagcctacagcgctgtctttgaggatgtagtggatgtgcttgctgagtggggctccttg
tacgtgctgacgcgggatgggcgggtccacgcactgcaggagaaggacacacagaccaag
ctggagatgttgtttaagaagaacctatttgagatggcaattaacctggccaagagccaa
catctggatagcgatggattggcccaaatcttcatgcagtatggagaccatctctatagc
aaaggcaaccacgatggggctgtccagcagtatattcgaaccattgggaagttggagcca
tcctatgtgatccgcaagtttctggatgcccagcgcatccacaacctgactgcctaccta
cagaccctgcatagacaatccctggccaatgctgaccataccaccctgctcctgaactgc
tacaccaaactcaaggacagctccaagttggaagaattcatcaagacaaagagcgaaagt
gaagtgcattttgatgtagaaacagccatcaaggtcctccggcaagctggctactactcc
cacgccctctacctggctgagaaccacgcacaccatgagtggtacctgaagatccagctg
gaggatatcaagaattaccaggaagcccttcggtacatcggcaagctgccttttgagcag
gcagagagcaacatgaagcgttatgggaagaccctcatgcaccacataccagagcagaca
acacagttgctaaagggactttgtactgactatcggcccagtctggaaggtcgaggcgat
agagaggctccaagctgccaagccaactctgaggagttcatccccatctttgcaaacaac
ccccgagagctgaaagccttcctggagcacatgagtgaagtgcagccagactcaccccag
ggtatctacgacacacttcttgagctgcggctgcagaactgggcccatgagaaggaaccg
caggccaaagagaagcttcatgcagaggccatctccctactgaagagcggccgcttctgt
gatgtctttgacaaggcgctggtgctgtgtcagatgcatgacttccaggatggggtcctt
tacctctatgaacagggaaagctgttccagcagattatgcactaccacatgcagcatgag
cagtaccggcaggtgatcactgtctgtgagcgccacggggagcaggacccctccttgtgg
gaacaggctctcagctacttcgcccgcaaggaggaggactgcaaggagtacgtggcagcc
gtgctcaagcacatcgaaaacaagaaccttatgccaccccttctagtggtgcagactctg
gctcacaactctacagccaccttgtccgtaatcagagactaccttgtccaaaaactgcag
aaacagagtcagcagattgcacaggatgagctgcgggtacggcggtaccgagaggagacc
tcccgcatccgccaggagatccaagagctcaaagcgagtccgaagattttccagaagacc
aagtgcagcatctgtaacagtgccttggagttgccctccgtccatttcctgtgtggccac
tccttccaccagcattgctttgagagttactcagaaagtgatgctgactgccccacctgc
ctccctgaaaatcggaaggtcatggatatgatccgggcccaggaacaaaaacgagacctc
catgaccagttccagcaccagctgaagtgctccaatgacagcttctctgtgattgctgac
tactttggccgaggggtattcaacaagttgactctgctgactgaccctcccacagccagg
ctgactcccaacctggaggctgggctgcagcgggacctgctcatgcactccaggaggggc
acttag
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integrated database retrieval system
