Dipodomys spectabilis (banner-tailed kangaroo rat): 122120321
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Entry
122120321 CDS
T07891
Symbol
Rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04217
Necroptosis
dsp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122120321 (Rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122120321 (Rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122120321 (Rbck1)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122120321 (Rbck1)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122120321 (Rbck1)
Multi subunit Ring-finger type E3
LUBAC complex
122120321 (Rbck1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-RING_5
IBR
zf-C3HC4_2
zf-C3HC4
zf-RanBP
zf-RING_11
zf-C3HC4_4
ubiquitin
Motif
Other DBs
NCBI-GeneID:
122120321
NCBI-ProteinID:
XP_042550474
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MDDKTKKAEEMALSLARAVAGGDEQVAVKCAIWLAEQRVPLRVQLKPEVSPTQDIRLCVS
VEDAQMHTVTIWLTVRPDMTIASLKDMVFLDYGFPPTLQQWVIGQRLARDQETLHSHGVR
QNGDSAYLYLLSACNTSLNPQELQRQRQLRMLEDLGFKDLTLQPRGPLEPVLPKPGAPQE
PGQPGAEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQVPASYQPDEEERARLAGEE
EALRQYQQRKQQQQEGNYQQHIQLEQKSLVLNTEPAECPVCYSALAPGEAVVLRECLHTF
CRECLQGTIRNSQEAEVSCPFIDNTYSCPGKLLEREIRALLSPEDYQRFLDLSVSLAETR
SAFSYHCKTPDCRGWCFFEDDVNEFTCPVCFHVNCLLCKAIHEHMNCKEYQDDLALRAQN
DMAARQTTEMLRVMLQQGEAMHCPQCQIVVQKKDGCDWIRCTVCHTEICWVTKGPRWGPG
GPGDTSGGCRCRVNGIPCHPSCQNCH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaagaccaagaaagcggaagagatggccctgagcctggctcgggcagtggct
ggtggagatgaacaggtagctgtgaaatgtgctatctggctggcagagcagcgggtgccc
ctgcgtgtacaactgaagcctgaggtctccccaacacaggacatcaggctgtgtgtgagc
gtggaggatgcccagatgcacactgtgaccatctggctcactgtacgaccagacatgaca
atagcctccctcaaggacatggtcttcctggactacggctttccacccaccctgcagcag
tgggtgattgggcagcggctggcacgagatcaggagaccctgcattcccatggggtgcgg
cagaatggggacagtgcctacctgtacctgctgtcagcctgcaacacctcgctcaacccc
caggagctgcagcggcagcggcagctgcggatgctggaagatctgggcttcaaggatctc
acattgcagccacgtggtcctctggagcctgtccttcccaagcctggtgcccctcaggag
ccaggacagccaggtgcagagcccccaccagtgggctggcagtgcccagggtgcaccttc
atcaacaagcccacgaggcctggctgtgagatgtgctgcagggcgcgacccgaggcctac
caggtgcctgcatcctaccagcctgacgaggaggagcgagcacgactggctggcgaggag
gaggcgctgcgccagtaccagcagcggaagcagcagcagcaggaggggaactatcagcag
catatccagctggagcagaagagtctggtgctgaacacggagcccgctgagtgcccggtg
tgctactcagcgttggcgcctggcgaggctgtggtgctgcgagagtgtctgcacaccttc
tgcagggagtgcctgcagggcaccatccgcaacagccaggaggcggaggtctcctgtccc
ttcattgacaacacctactcctgtcctggcaagctgctggagagggagatccgggcgctc
ctgtcccctgaggactaccagcgcttcctggacctcagcgtctccctggcagagacccgc
agtgcattcagctaccactgcaagacccccgactgcaggggctggtgcttctttgaggat
gatgtcaatgagttcacctgccccgtgtgcttccacgtcaactgcctgctctgcaaggcc
atccacgagcacatgaactgcaaggagtatcaggacgacctggcccttcgggctcagaat
gacatggctgcccggcagacgacggagatgctgagggtgatgctgcagcagggcgaggcc
atgcactgcccgcagtgccagattgtggtgcagaaaaaggacggctgcgactggatccgc
tgcacggtgtgccacacggagatctgttgggtcaccaagggcccgcgctggggcccgggc
ggcccaggggacaccagtgggggctgccgctgccgggtcaatggaattccttgccacccc
agctgtcagaactgccactga
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