Dichomitus squalens: DICSQDRAFT_130738
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Entry
DICSQDRAFT_130738 CDS
T03133
Name
(RefSeq) histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dsq
Dichomitus squalens
Pathway
dsq03082
ATP-dependent chromatin remodeling
dsq03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
DICSQDRAFT_130738
03083 Polycomb repressive complex
DICSQDRAFT_130738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsq03036
]
DICSQDRAFT_130738
Enzymes [BR:
dsq01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
DICSQDRAFT_130738
Chromosome and associated proteins [BR:
dsq03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
DICSQDRAFT_130738
HDAC complexes
Sin3A-HDAC complex
DICSQDRAFT_130738
BRAF-HDAC complex
DICSQDRAFT_130738
REST complex
DICSQDRAFT_130738
SHIP complex
DICSQDRAFT_130738
MiDAC complex
DICSQDRAFT_130738
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
DICSQDRAFT_130738
Heterochromatin formation proteins
Other heterochromatin formation proteins
DICSQDRAFT_130738
Chromatin remodeling factors
NuRD complex
DICSQDRAFT_130738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
18834690
NCBI-ProteinID:
XP_007360033
JGI:
130738
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MPPEMTPIDGESQRKRVCYFFDSDVSGFHYGPGHPMKPTRIRMCHSLVMNYGLYKRMEIF
RAKPATKREMTQFHSDEYVDFLSKITPSNMNSFIKEQHKYNVGDDCPVFDGLFDYCAISA
GGSMEGAARLSRDKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRYHTRVLYID
IDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDVGIGKGKYYALNFPLRDGVTN
ENYQSVFEPVMRQVMESYDPGAVVLQCGTDSLSGDKLGCFNLSMRGHANCVQFIKSFNKP
LLLVGGGGYTMRNVSRCWAYETGLAAGVELGKEIPMNEYYEYFGPDYELDVKASNMDDMN
SPEYLERVKGIVLDHLRQVGGPPSVQMQDVPRLPIDDIVEDDPDEDMVDPNDRRPMRLLD
SRRQNDGEFSDSDDEGEGGRRDHASNKDRDTVGTGRRFGAAAVGIMSTGTTHGVGPSVAP
PVAGSSAAPPAVSSEQSDMDVDEVPLAQAAKAKAPSSKANGTAASGET
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcctccagaaatgacccccattgatggagagagccagcgcaagagggtgtgctacttc
ttcgattcggatgtcagtggcttccactatggccccggtcacccaatgaaacctacacgg
atacggatgtgtcattctctcgtcatgaactatggcctgtataagcgcatggagattttc
cgagccaaaccggctacgaagcgcgagatgacgcagtttcactccgacgagtatgtagac
ttcttgagcaagattacgccatccaatatgaactccttcatcaaggagcagcataaatac
aatgtcggtgacgattgtcccgttttcgacgggctctttgactactgcgctatttccgcc
ggcgggtccatggagggcgctgctcggttgagccgggataagtgcgacattgctgtcaac
tgggctggcggcctccaccatgcgaaaaagagcgaagccagcggcttctgctatgtaaat
gatattgttcttggcattttggagcttctgagatatcacacccgtgtgctctacattgac
atagatgtacaccacggagatggtgtggaggaggctttctataccactgaccgcgtaatg
actgtcagcttccacaaatatggcgagtacttccctggaaccggagagcttcgagacgtt
ggaattgggaaaggcaaatattacgcactcaattttcccttgagagacggtgtaacaaac
gagaactaccagagcgtattcgagcctgtgatgcggcaagtcatggaatcttacgaccca
ggcgccgttgtgttgcagtgtggaacggattcactatcaggcgacaagctaggttgcttc
aatctttctatgaggggacacgcaaactgtgttcaattcatcaagtccttcaacaagcct
ttgctcctcgttggtggtggaggctacaccatgcgcaacgtcagtagatgttgggcgtac
gaaacaggattggcagcgggcgtcgaacttggaaaggagatccccatgaacgagtattac
gagtactttggtccagattacgaactagatgtgaaggcgtcaaatatggacgatatgaac
tcccccgagtacctcgaacgcgtcaagggcatcgttcttgaccacttgcgccaagttggt
ggtcctccaagtgtacagatgcaagacgtccctcgactaccaatagatgacatcgttgaa
gacgaccctgacgaggacatggtcgaccccaacgaccggcgaccgatgcgtcttctcgac
tcacggagacagaacgatggcgagttctccgactcagacgacgagggtgaaggggggcgc
cgcgaccatgcgagcaacaaagatcgcgacacggtcggcacggggcgacggttcggtgct
gccgcggtcggcatcatgagtactggaacgacgcacggcgtggggcccagtgtcgcaccg
ccggtcgccggtagttccgcggctcctcctgcggtctcatcggaacagtcggatatggat
gtggacgaggtccctctcgcgcaagctgccaaagccaaggcgccttcgagtaaggccaat
gggacggcggcgtcgggggaaacgtga
DBGET
integrated database retrieval system
