Dichomitus squalens: DICSQDRAFT_160484
Help
Entry
DICSQDRAFT_160484 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K10887
DNA cross-link repair 1C protein [EC:3.1.-.-]
Organism
dsq
Dichomitus squalens
Pathway
dsq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DICSQDRAFT_160484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_160484
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
DICSQDRAFT_160484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DRMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
18838008
NCBI-ProteinID:
XP_007363810
JGI:
160484
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MPQGTPYNAFIPPYPIRVDQFTDPALSTHSFSGREKTANLYLLTHTHTDHLIGLSARSFA
QTVVCSHDAKEMLLRHQVYAERALRDAELRAENVRAFSHLRVEPQRMDDGSVDYAGSRDL
LRATHIHLPTRFILNNEEDVTITLLDANHCPGAVMFLVEGAKGTVLHTGDLRAEPLFLEN
LKRNPYIQRYVHNPRSSSSAHVLSTLDAIYLDTACLLNDYEVPPKVEAAAGLTGLMALYP
STTRFFLNLWTWGYEDIYKAVAQRFDTTIHVDRYKHSVYAHISGDPFLQMIVTRDESSTR
FHACERFERCEHVRVVGRESHTPSGHHVVYVNPVNMDVNSWQRYLQETREQLQRGKQVNV
LLVPLARHSTLPELRNLVSLFKPRRVVPNTLDPTLKGLDAACIQKMFAGCLAEASPSTHE
SVAPSASELSELDAAMRGGEGEDVAFQNLEGDGAREIAEKWADSGRMRRKLSVMKQYLPS
SLRHKVEQILDGRHRPSASSLPAQPSKRLRSKGTARDPELPSSPPPPPSAPDKPKRVFQG
RATMAEAAAAMARIERNRNVPKALRSPEPDSETDDDDHEEEHEFFANYLFGDQAGTPAKE
RFYAILNADRTSPSLVSSPVTPQQPAAGPSRVVQLPGDLPLTPSSKRGSEGLTHWLKSSS
PPSAEDGTQPCITLPRPQTLNTAVAGEAEKPQTPHRATILSSPFALNTARKDKAIAIPTP
ATRTRQPPGLFKDKDERPSRSHGHTLAPLASLLAPAAHASPQHTHHAKDSPSSVAVAVGS
STHGSPEPLLDLRNLRKRPTAAHDLDQEDDASNSPKRRRVSTDMASTAPLPMSDRTTVAI
QDDTITVHSPRGVGPLRIDSGSQAQHAHWGSRTRTPNEELEHAASSASRIRGAIAVSVGG
ATPVTRTVEGPVGAASISESAVTASAGVSANGLTEPNATDKHQNKSRANSRMHRLAIAER
LAKALPASFVTPSFKARKERERLREERRYLSNGPVGEIASVCASSPNLHLEGVNADKTAD
DLVGSSNSRKRGDAIDAVSVHKWKVPPRLPSQDEYMEEDVAARVAAKRESFQQQLAQGIR
PGLFVPRLRCLESQEEGGVPYIAQG
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagggaacaccctacaacgccttcattcccccataccccatccgcgttgaccag
ttcaccgaccccgccttgtcgacacactcgttctctgggcgagagaagacagccaatctc
tacctcctcacccacactcacacggaccacctgataggcctgtctgcacgatcgtttgcc
cagacggtcgtgtgctcgcacgacgcaaaagagatgctactccgccaccaggtttatgct
gaacgtgccttgcgcgacgccgaactacgtgcagaaaatgtgcgggctttttctcacttg
cgggtcgaaccacagcggatggacgatgggagtgtagactatgcgggctcgagggatctg
ttgcgcgctactcatatccacctcccgacgcgcttcatcctgaataacgaagaggacgtc
actatcaccttgctcgatgctaaccactgcccaggcgctgttatgttccttgtggaggga
gcgaaaggtacggtgctgcacacaggagacttgcgggcagagccattgttcctcgagaac
ctaaagcgcaatccctacattcaacgttatgttcacaatccacgttcttcgtcgtccgcc
cacgtgctttctacccttgacgccatctaccttgacacggcatgcctgcttaacgattat
gaagtcccacccaaggtcgaagcagctgcagggttgactggactgatggcgttatacccc
tctactacacggtttttcctcaatctctggacttgggggtacgaagatatctacaaggca
gtggcccaaaggttcgataccacaatacacgttgaccgctacaaacactccgtgtatgca
catatatcgggcgacccattcctccagatgattgtcactagggacgagtcgtcgacacga
ttccacgcttgcgagcggttcgagcgatgcgagcacgtccgggtcgtcggtcgggagtcc
cacacgcccagcggccatcacgtggtttacgtcaatccagtgaatatggacgtgaattcg
tggcaaaggtacctccaagaaacccgagagcagctgcagagaggcaagcaggtgaacgtg
ctgcttgtcccgctagcacgacactcaacgctgccagaactgcggaatcttgtttcattg
ttcaagccgcggcgcgtagtaccgaacacactcgatccgactctgaaaggattagacgcg
gcttgcatacaaaagatgttcgctggctgcctggctgaagcctccccgtcgactcacgag
agcgtcgcaccgtccgcgtcggagctcagtgagctggacgctgccatgcgaggtggtgaa
ggcgaggacgttgcttttcagaacctcgagggcgacggtgcgcgggaaatcgcggagaag
tgggcagacagcggtcgcatgcgcaggaagctgtccgtcatgaagcaatatctccctagc
tctctacgccacaaggtcgagcagatccttgatggacgtcatcgtccgtccgcttccagt
ctacctgcccagccttccaaacgtctccgtagcaaaggtaccgctcgggatccggagcta
ccctcctcgcccccgccaccacccagcgcgccagacaagcccaaacgagtttttcagggg
agagcgactatggcggaggcggcagccgcgatggcccgcatcgagcgtaaccgtaatgtt
cccaaggccctccggtcccccgaacccgactcagagactgacgacgacgatcacgaggag
gagcacgagttctttgcgaattacctcttcggagaccaggctgggactcccgcaaaggag
cgcttctacgcgattttgaatgcggataggacgtctccctctttggtctcgtcgccggtc
actccgcagcagcctgccgcgggcccttcgcgggtcgtgcagctgcctggtgacttgccg
ctcaccccgtcgtcaaagcggggatccgaaggcctgacccattggctgaagtcctcttcg
ccaccttctgcggaggatggtacgcaaccgtgtataacgctgcctcgaccacaaacatta
aataccgccgtcgcgggcgaggcggaaaagccgcagacgccccaccgtgcaacgatactg
agctctccttttgcgctcaatacagctcggaaggacaaggcaatcgctatccccacaccg
gccacgcggacaagacagccccctggccttttcaaggacaaggacgaacgtccgtcgcgc
agtcacgggcacaccctcgctcctcttgcgtccctcctcgctccagctgcccacgcctcc
cctcagcatacacaccatgcaaaagattctcctagcagtgtggccgtagctgtcggatct
tctacccacggaagcccagagcctctcctcgacctccgcaatctccgcaagcggcctact
gcagcccatgatttggaccaagaagacgacgcctcgaatagtcctaagagaaggcgtgtc
agcaccgacatggcctcgacggctccccttccgatgtcagatcggacaacagtggcaata
caagatgacacgatcaccgttcactctccgcgcggggtcggaccactgcgaatagactca
ggctcacaggcgcaacacgcccactggggctcaagaaccagaaccccgaacgaagaactt
gaacatgcggccagttcagcttcgcgaatcaggggtgcaattgcggtatctgtaggaggg
gcgacacctgtaacaagaaccgtcgaaggtcctgtaggcgctgcctcgatctctgaatct
gccgtaacagcgtcggcaggcgtgagcgcgaacggcctaaccgaaccgaacgcaacagac
aagcaccaaaacaaaagcagggcaaactcgcggatgcaccgtctcgcgatcgcagaacgg
ctcgcgaaggcactcccggccagctttgtcaccccgtcattcaaggccaggaaagagcgc
gaacgtctgcgggaggaacgacggtacttgtcgaacggacctgttggtgagattgccagt
gtgtgtgcgtcaagcccgaacctccatctcgaaggcgtcaacgccgataagaccgccgac
gaccttgtgggaagcagtaatagcaggaagcgcggcgatgcaatcgacgccgtatctgtg
cacaagtggaaggttccgccaaggttgccgtcacaagacgaatatatggaggaagacgtg
gctgcgcgggttgccgctaagcgagagtcgtttcagcagcaactggcgcaaggtatacgc
ccgggactgttcgtcccgcggctgcggtgtctcgagagccaggaagagggaggcgttccg
tacatcgcacagggttga
DBGET
integrated database retrieval system
