Dichomitus squalens: DICSQDRAFT_71225
Help
Entry
DICSQDRAFT_71225 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K14828
pre-rRNA-processing protein RIX1
Organism
dsq
Dichomitus squalens
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsq03009
]
DICSQDRAFT_71225
Ribosome biogenesis [BR:
dsq03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
DICSQDRAFT_71225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIX1
DUF5742
Motif
Other DBs
NCBI-GeneID:
18843770
NCBI-ProteinID:
XP_007370657
JGI:
71225
UniProt:
R7SKD3
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MDGSNRLKDFLQLQLASDSYAVLHLPFVLETLSKEDFLPSSHTLKWIARVNSLIHSKDPA
ARWSGLCLAFQTATFSRDIMLECAQSWVGAAMPLLVNQPLPTTKAAIRLLRLVFSSAMDV
TEYQRQLCIPNVPKYASALIALLEKDSSTETAVLAIDTLEHIVSLYPSLCRPLHNQLSNV
ALRSLNGSAPTPMSDKLVEACSRLYAVLPLTGGKVNAPSLWRKSLDDTMTFAWGAFLQVR
TTYPDRGYGVPHLAPPSDDPIVDVPLALDRLRAATRVIGDLLRTSTSRPISLPVGPLVRL
CLALLQSTLEDKGIAHANHVVHALEASVIPTLWGFACEILISVAKAGRHHLTPHLPPLLT
SLAYHLEQPQNLIASRLVRATLPKLAILLSKRSQAGTENEQASGQGRSKKGRRHARGYEG
DEVFKVGRRIVCVTAEEGDVLLVSVDLLEILLSRTQVNAPVHSIASRLLLAIYASLPQLP
PSILSSDLSLKQRLCAKLKRLCMGLAIGTTSTMSKCVGLVLSISDGTVDEDDDLTVHTTV
DLLLHPRAPPLVRSLPHVELLSLFRAEEGEEEADTRRRVGLHVLDERSDRLPDATGSQTP
HEAEWTRLQPSVPQAARSPGAPSAQEPYGTVAMQVDVSPLAPTAGQASRDPPSSAGLERS
QPPTSFAHKQSATHRTAQSPLPPPDPLPSNSTALSLESKPASDLPVTQATAPLMEDDDDD
EPMPTIDLASDSESE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggacggttctaatcgcctgaaagattttttgcagctacagctagcctccgactcctac
gccgtcttgcacctgcccttcgtcctggaaaccctttcgaaggaggacttcttgccttcc
tcccacacgctgaaatggatagcccgcgtcaactccctcatacactcaaaggatcctgcg
gcgaggtggagtggattgtgcctggcattccagacggccacattttctagagacatcatg
ctggagtgcgctcagagttgggtcggagcggcaatgccgttgctcgtaaaccaaccacta
cccacaaccaaggccgctatcagactattaagactcgttttctcgagtgcaatggatgtt
acggagtatcagcgtcaactttgcatccccaacgtcccaaagtacgccagtgccctcatt
gcactcctcgaaaaggactccagcacagagaccgctgtcctggccattgacacactggaa
catatcgtgtccctctacccctcactctgccgacccctccacaaccaattatccaacgtg
gctctgcgctcgctcaatggctcggccccaacaccgatgtcagacaagcttgtcgaagca
tgctcgcggttgtacgctgtactgcctctcactggtgggaaggtgaacgctcctagtctt
tggcgaaagtcactggacgatacaatgaccttcgcttggggtgctttcctacaagtgagg
accacatatcctgacagagggtatggtgttcctcatctcgcacctccgtcagacgatcca
atcgttgatgttccgttggctttggatcgtctacgtgcagctactcgtgtaattggagat
ctccttaggacgagcacctcacgccctatatcactgcctgtggggcccttggtacgatta
tgcctggctctgctacagtccacgttagaggacaagggtattgctcatgcaaatcatgtc
gtacatgcgctggaagcctccgtcattccgacgctgtggggtttcgcctgcgagatactg
atttccgtggcgaaagcaggtcggcatcatttgacccctcatctgccaccgcttctgacc
agtcttgcgtatcatctggagcaaccacaaaatctaattgcatcgcggttggttcgtgcg
accttacctaagcttgccatcctgttgtcaaaacgttcacaagccggtaccgagaacgag
caagcatctggacaagggagaagcaagaaaggcagaagacatgcgcgcggctacgagggc
gatgaagtattcaaggtcggtcgccggatcgtatgcgttacggcagaggagggcgatgtt
ctccttgtctccgtcgatctgctcgaaatccttctgagtagaactcaggtcaacgcgcca
gtacactcgattgcgtcccgactcttgctcgcgatctacgcctctctcccgcagctgccg
cccagcatcttatcgtcggatctgtccctgaagcaacgcttatgtgctaaactcaaacgg
ctgtgcatgggtctcgcgatcgggacgacaagcaccatgagcaaatgcgtcggcctcgta
ctgagcatatcggacggcacggtcgatgaagatgacgacctcactgtacacaccacagtt
gaccttctacttcatccgcgtgccccgccattggtgcgatccctgccccatgtcgagctg
ctatcgcttttccgtgccgaagagggtgaggaagaagcggacactcggagacgtgttggc
ctacatgtcctagacgagcgcagcgaccgactaccggacgcgactggaagccagacgccg
cacgaggcagagtggacaaggttacagccatctgtaccgcaagcagcgagaagccccggg
gcgccgtcagcacaggaaccctacggcactgtagccatgcaggtcgatgtctctcctctt
gctccaacggcaggtcaagcttcgcgggatccgccatcctctgccgggttggaacgttcg
caacccccgacttccttcgcacacaagcagtcggcgacccaccggacagcgcaatcaccg
ttgccgccgcctgatccattgccgtctaacagtactgcattaagtctggaatcgaaaccc
gcttcagatctccccgtaacccaagcaactgcccccctgatggaggacgatgacgatgac
gagccaatgcccactatagacctcgcttcggactccgaatccgagtag
DBGET
integrated database retrieval system
