Drosophila serrata: 110176306
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Entry
110176306 CDS
T06108
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
dsr
Drosophila serrata
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsr03019
]
110176306
Messenger RNA biogenesis [BR:
dsr03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
110176306
3'-5' decay
Other 3'-5' decay factors
110176306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
ResIII
AAA_19
AAA_22
PAM2
PhoH
TFIIA
zf-C2H2_jaz
AAA_14
Snu56_snRNP
Mg_chelatase
TMEM51
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
110176306
NCBI-ProteinID:
XP_020798286
LinkDB
All DBs
Position
Unknown
AA seq
2174 aa
AA seq
DB search
MAAEKEMQAHDMVRRRSWARAVALYDQLITTPASGGGTTRAQKDQQIACLLGRCECLLEL
GKFEGCLADAYKVLTLLSEQTECLASVSRARRWLVHALFKMHKYGDAEIFLSKWINELSG
QQIYSDISKTLERYKSIIQMIMNGQHKSQAQKIPHARLEDEMAILDTKLDHWATNNLPLD
KYSKLLSNKGLKKREQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNGNGTGSYASSSSNSS
TGSSSTMSSSSTSLHKTNDLLAAMKLTAGKHQPGSGDGSSSDGGDQAAPSTTCSYCAITF
QTRNELRQHCQTEAHQKVIMSDEGRDWKWRPPPRGYTLDTYSLCETFSEAHTCHYGAQCV
EAHGQDELNEWKERFEYRRMRVQKACEKELYGKSYTEQVLERWIQATAPERVMCERVPDM
EARCEQQLVTSISSKTSKREWLFQLETKKPLKAVALLQDAHRNHFALKSIRMTKPTETSM
ELKSDQEWVAGSSSSSSSSEASGDETSPTLCHEITVEFQTEIYGTFRQAICFDVGQEPLL
VRHLCVDVLPVNDAEKIEEIKRDIINSSATRWDVANTQLTRFETTIGTHLKTEAYLSDLE
HERELLERYPCPRAATFTLTQSTIVEKRLTQNNYRSRIHELLSVEEIARYEQIARYNVRT
RLTVASNYILTPAGMATSTAKYSLAGELFALMRLGKDISEDTSPGRLILSNCSSVYISKP
EEPDSKANPDQLRQVYEALIEDKGKNVIYLKLSAKCVEAMSLQADTELDVDIQFQLNRMP
YCEWHNAVDKITDFRLIFPATELEPSIPWTPKKQWADACEPKLNAKQREAVNAITTALSI
KLPPILLIGPFGTGKTYTLAQAIKQLLAQPEAKILICTHSNSAADLYIKEYLHPWIEEGL
EEATPLRVYYHKRWSATVNGVVQKYCITDGAGNFKRPSVEDIMRHRIVVVTLSISMELAT
LGLPKGLFTHIFLDEAAQAMECEAIMPLALANDSTRIVLAGDHMQMSPELFSAFAKERKL
HISLLERLYDHYPSNFPCKILLCENYRAHEAIIRFTSELFYEQKLVASGKQPRHERFYPL
TFFTTRGEDVQDKNSTAFYNNAEVYEVVERVSELRKRWPSAWGKLNDTSIGIMTPYADQV
FRIRSELRKRRMGGISVERVLNVQGKQFRAVFLSTVRTRRTCMPQGSAPGGSTASSTASI
GDADTDYGFLSNSKLLNTAITRAQSLVAVVGDPVALCSIGRCRKVWERFIEICDEHKSLF
GLTWSNLRSQLDGVELKRGYVLNPLAPEFVPRALQPEAYLREQAALYLNGPQHGHGGVGG
HGPGPGPPAHFASAAAAAGMLGPGPAVAAHQMNQMAAAMAANQQLSHMYSTHMAAMMAAA
AAVGGKSGSGPGAGGPGGPGPGPPPHFGGGGGGGGHMGMRGPPPPAPHLRGMPPGGPPPV
QQPGGAGVGGGGGGGGGPPPPPYGQYPAMQHWRPPQQGQNQGPGLGQQPQPPQNPNASLW
GPPPQTNPWSVLPPNKQQQPQQPQPPPVSAPGRGPGPPPLNANPSLPLRGGSVPPPPPNA
SAAAQQLLRNPSELGYLAKKTLYNHGQAPPHHQLYGPGPGPGQPPPPSQQQQQLQRGSSV
PNGPMSPMENGPPPPPYLRHNGSAGGYNTGAPPLPQQQPPQQQQPPPNPFMYGAGKQPSP
SSMRFGGPLTHDLLPPNVSIYEMAFNPKEEQYKWYLKLLETVGQDGANKFADMLRQVMNS
MQQQPQHKPPPPPPQQQQMVNNPMLTNPHVQRPQYPMMYPQQGQQQQQPPPQQQQQQSVD
ASPPLENFNQQIDLVFNSIMNGANDIAQPILRDVLGMVAGAGNNPGPPPPLANGLNAADL
QQQQQQQQSRLFAMMQQQQQQQQLKPPPGPLYPNHMGPGPGPGLHQAPPNGTNTNFMGNA
GNALLNDKPYNNLNMHNNVGLNSAAGMGLGGGGGGGGVAGGGGIGNHNNNNNSNNNGLLM
NGNNSVPLYRRQALAGNGIGGGYNMSGLDTGANLIEALFQANNSMVADHSVKSQPSDHMH
GLLYNNFNAMKGGNHDVDLFQALPPSIVSHSEAGGSHHHHHQHQQSSGGGSSSAATTYAA
VLSQGHQAVGGGNNAGPSAGQSQGQAGSVTGAGSGGKSSQAGGGGGGGDLLEKDPFAAIR
ELGQATTGFYNYFQ
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgagaaggagatgcaggcccacgacatggtccgacgacggagctgggcccgt
gcggtggccctctacgatcagctcataaccacgcccgcttccggtggtggcactacgaga
gcacagaaggatcaacagattgcctgcctgctgggtcgttgcgagtgtctcctggagctg
ggcaaattcgagggttgcctggcggacgcttacaaagtgctcacattgctctctgagcaa
accgagtgcctggctagcgtttccagggcacgccgctggctcgtccacgccctcttcaag
atgcacaagtacggggatgctgagatctttctgagcaagtggatcaatgagctgagcggc
cagcaaatatactcggacatatccaagacccttgaacgctacaagtccatcatacagatg
atcatgaatggccagcacaagtcgcaggcccagaagatcccgcacgcccgtctcgaggac
gagatggccatactggacaccaaactggatcattgggccaccaacaatttgcctttggac
aagtacagcaaattgcttagcaacaagggtctgaagaagcgtgagcagcagcagcagcaa
cagcaacaacagcagcagcagcagcaacaacagcagcagcaacagcaacaacagcagcag
caacagcagcaaaatggcaatggaaccggcagttatgctagcagcagtagtaattccagt
actggcagcagcagcactatgtccagttccagcaccagcctccacaagaccaacgatctg
ctggcagccatgaaactaacagccggcaagcatcagccaggctctggcgatggctccagc
tcggatggcggtgaccaggcggcgccatcaaccacctgcagttattgcgccatcaccttc
cagacgagaaacgaactgcgccagcactgtcagaccgaggctcatcagaaggtgatcatg
agtgatgagggccgtgactggaaatggagaccaccgcctcgcggctacaccctggacacc
tattccctgtgcgaaacgttcagtgaggcgcatacctgccattacggagcccagtgcgtg
gaggcccatggccaggatgagctgaacgagtggaaggaacgcttcgagtatcgtcgtatg
cgagtgcaaaaggcctgtgagaaggagctgtatgggaagtcgtacacggaacaggtccta
gaacgatggatccaggccacggcaccggaacgagtgatgtgcgagcgggtgccagacatg
gaggcgagatgcgaacagcagctggtcaccagcattagttcgaagacctcgaagcgagag
tggctctttcagctggagacgaaaaaacccctgaaagcggtagccctgctccaagatgcc
catcggaatcactttgccttgaagtccattaggatgaccaagcccacggagacgagcatg
gagctaaagtcggatcaggagtgggtggcaggcagcagcagcagcagtagttcgtcagaa
gccagcggcgatgagacctccccgacgctgtgtcacgaaattactgtggagtttcagacg
gagatctatggaacgtttaggcaggccatctgctttgatgtgggtcaagagccgctgcta
gtccggcatctctgcgtggacgtgctgcccgtgaatgatgcggagaagattgaggagatc
aagcgggacattatcaacagttcagccacccggtgggatgtggccaatacgcaactcact
cgatttgagaccaccattggcacgcacctcaagacggaggcgtatctcagcgatctggag
cacgaacgagagctgttggagcgatatccctgccccagggcggccacctttacgctgacc
cagtcaacgattgtggagaaacgattgacgcagaacaactatcgatcccgcatccacgaa
ctgttgtcagtggaggagatagcccgctacgagcagattgccagatataatgtgcgtacg
cgtttgacggtggcctccaactatatcctaacaccggctggaatggccacgagcacagcg
aaatattctctggctggtgagctgtttgctctgatgcgtttggggaaggatatctcggag
gatacgtcacctggccgcctgattctctccaactgcagcagtgtgtacatctcaaagcca
gaggaaccggactctaaagctaaccccgaccagctgcggcaagtctacgaggctctgatc
gaggacaaaggcaagaatgtgatctatttgaagctgtcggccaagtgcgtggaggcaatg
tccctgcaagcggatacggaactggacgtggacatacagttccagctgaatcgaatgccc
tactgcgagtggcataatgctgtggacaagatcaccgacttccgactgatctttcccgcc
acggagctggagcccagtataccctggacgccgaagaaacagtgggccgatgcctgtgag
cccaagttgaatgccaagcaaagggaggcagtgaatgccattaccacggctctgagcatc
aagttgccaccgatcctgctcattggaccctttggcacaggcaaaacctacactctggct
caggctatcaagcagctgttggcccaaccggaggccaagatactcatctgtacgcactcg
aattcggcggctgatttgtacattaaggagtacctgcatccgtggatcgaggagggtctg
gaggaggccacaccgctgagggtgtactaccacaagcgatggtccgccacggtgaacgga
gtggtgcagaagtactgcatcaccgatggcgctggcaacttcaagcggcccagcgtggag
gacataatgcggcataggatcgtggtggttacgctgagtatcagcatggagctggccact
ctgggcctgcccaagggtctcttcacgcacatcttcctggacgaagcggctcaggcaatg
gagtgtgaggctataatgcccttggccctggccaatgattccacgaggattgtgctggcc
ggagatcacatgcagatgagtccggagctgttctccgcctttgccaaggaacgtaagctg
cacatttcgctgctggagcggctgtacgatcattatccctccaacttcccgtgcaagatc
ctgctctgcgagaactaccgcgcccacgaggccatcatccgcttcacatccgagctcttc
tacgagcaaaagctggtagcttccggaaagcagccgcggcacgagcgcttctaccctctg
accttcttcaccacccgaggcgaggatgttcaggataagaactcgacggccttttacaac
aacgccgaggtctacgaggtggtggaacgtgtctccgagcttcgaaagcgatggcccagt
gcctggggcaagttgaacgataccagcattggaatcatgacgccctatgcggatcaagtg
ttccgcattcgatcggagttgaggaaacgacgcatgggcggcatatccgtggagcgagta
ctcaatgtccaaggcaaacagttccgggcggtcttcctctccacggttcgcacgcgacgc
acttgcatgccgcagggtagtgccccgggtggatcgacagcctcctctacggccagcatc
ggggatgccgacacggactacggattcctgagcaactccaaactcctgaatacggccata
acacgtgcccaatctctggtggccgtggtgggtgatcccgtcgctctctgttccatcgga
cgctgccggaaggtgtgggagcgcttcatcgagatctgtgacgagcacaagtcgctgttc
ggtctgacgtggtcgaacctacgctctcagctggatggtgtggagctgaagcgcggctat
gtgttgaatcctctggctcccgagttcgttccgcgtgccctgcaaccggaggcatacctg
cgagagcaggctgctctctacttgaacggaccccagcacggacatggcggagttggtggc
catggaccaggtcctggtccgccagcacactttgcctctgccgctgcagcagctggaatg
cttggtcccggaccggcggttgctgcacatcagatgaaccaaatggcagctgccatggcg
gccaaccaacagctctcgcacatgtactccacgcacatggcggcgatgatggctgccgca
gcggcagtgggagggaagtctggcagtggtcctggggcaggaggtcccggaggacccggt
ccagggccaccaccacactttggcggtggcggtggcggcggcggtcacatgggaatgcgt
ggaccaccgccgccggcgccacatctacgaggaatgccacccggtggtccgccgcctgta
cagcagccaggaggggctggtgtgggcggaggaggaggaggaggaggtggaccaccacca
ccaccctatggacaatatccggccatgcagcactggcggccaccgcaacagggtcagaat
caaggcccgggactgggacaacagccacagccgccacagaatcccaacgccagtctctgg
ggaccgccgccgcaaacgaatccgtggagcgtgctgccaccgaacaagcaacagcaaccg
cagcagccgcaaccgccaccagtgagtgctcccggacgcggtccaggacccccaccgctc
aatgcaaatccttcacttccgctgcgcggtggaagtgttcctccgccgccgccaaacgcc
tcggcagccgcccagcagctgctgaggaatcccagcgaactgggctacctggccaagaag
acgttgtataatcacggtcaggccccgccacatcatcagctttatggacccggacctgga
cccggccagccaccgccaccgtctcagcagcagcagcagttgcagcggggcagcagtgtg
cccaacggacccatgtcgcccatggagaacggaccaccgccgccgccgtatctgcggcac
aatggaagcgccggtggctacaatacgggagccccaccgttgcctcagcaacagccgccg
cagcagcagcagccaccgccaaatccctttatgtacggtgctgggaagcagccctcgccg
agttccatgcgtttcggtggtcccctcacccatgacctactgccccccaatgttagcatc
tatgagatggccttcaatcccaaggaggagcagtacaaatggtatctcaaactgttggaa
acggtgggtcaggatggagccaacaagtttgcggacatgttgcgccaggtgatgaactcg
atgcagcaacagccgcaacacaagcctccgccgccgccaccgcaacagcagcagatggtg
aacaatcccatgctgaccaatccgcatgtgcagcgaccgcagtatcccatgatgtatcca
cagcagggccagcagcagcagcagccaccgccgcagcagcagcagcaacagtccgtagat
gcttcaccgccgctggagaacttcaaccagcagattgatctggtctttaactccatcatg
aatggagctaacgacattgcccagcccattctgcgggatgtgctgggcatggtggccgga
gctgggaataatcctggtccaccaccaccgctggccaatggactcaatgcagccgatctc
cagcagcagcagcagcagcagcaaagtcgtctgtttgccatgatgcagcagcagcagcaa
cagcaacagctgaagccaccaccaggaccgctctatccgaaccatatgggacctggacct
ggacctggcctccaccaggcaccgcccaatggcactaacacgaactttatgggcaatgct
ggaaatgctctgctcaatgataagccttacaacaacctgaacatgcataacaatgttggt
ttgaacagtgctgctggcatgggattaggaggaggcggaggcggcggcggtgtcgcaggc
ggaggtggtattggtaaccacaataacaacaacaatagcaacaacaatggactgttgatg
aatggcaacaactcggtacctctataccggcgacaagcattggctggaaatggaatcggt
ggcggttacaacatgtccggattggatacaggcgccaatttgatagaagccttgttccag
gccaataactcgatggtagccgatcattcggtgaagtcacagccttcggatcatatgcac
ggattgctgtacaacaatttcaatgcaatgaagggtggcaaccatgatgtggacctattc
caggccctgccgcccagcattgtgtcccattcggaggcgggcggaagtcaccatcatcac
catcaacaccagcaatcgtcgggaggcggttcctcgtcggcggccaccacatatgcggcc
gtactgagccagggacatcaggctgtgggtggaggcaacaacgcgggaccctcggcgggg
caatcgcagggtcaggcgggatctgtcacaggtgccggcagcggcggtaagtcttcgcag
gcaggcggcggtggcggcggcggtgatctcttagagaaggatccgtttgcggccattagg
gaactgggacaggccaccaccggtttttacaattattttcagtga
DBGET
integrated database retrieval system
