Drosophila serrata: 110178598
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Entry
110178598 CDS
T06108
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
dsr
Drosophila serrata
Pathway
dsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110178598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsr03041
]
110178598
Enzymes [BR:
dsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110178598
Spliceosome [BR:
dsr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110178598
Complex B
110178598
Complex C
U2 SnRNP specific factors
110178598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
End3
Motif
Other DBs
NCBI-GeneID:
110178598
NCBI-ProteinID:
XP_020801442
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MSGYRGMGGGGFPYRKPASSGNNMNAVPPPPMLNARGYVGRGGSIASLSRGGGSSSSTSK
HGYSTLDSISQYTNATNLVGKRKQHTDDDYFDDDDEPAQQHRDLEQAYIPAPGSPGAPPS
SATASSSKQDSDSDEDPLEQFMAGINQQVEKEKRQQQPKSQSQAIRGDIDDEDDEESYYR
YMKENPTAGLRDDGSDQEVEYDEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFEKNFYTQH
EDIAALDEDQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDDALIKAVRKAEYTQPTPIQA
QAVPTALSGRDIIGIAKTGSGKTAAFIWPLLMHLMDQRELKPGDGPIGLILAPTRELSLQ
IYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRRV
TFLVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFKKRIERLARDVLSDPVRIVQ
GDLNEANQDITQSVFVFPNPLQKWNWLLCHLVKFLSEGSVLIFVTKKADAETVANNLLVK
EYNCLLLHGDMDQADRNKVIMQFKRKECDILVATDVAARGLDIPHIRNVVNYDIARDIDT
HTHRIGRTGRAGEKGNAFTLVTDKDKEFAGHLVRNLEGADQQVPDDLMELAMKSSWFRSS
RFKQGKGKKPTNTHTGLGYRERERGNGTGAGAGSGSGTGSGGDRSASSSSSEGAVSKSAS
NAGPATDRYAAMREAFRSQYNNQFRASSDRTWEKTLPEAGVFAAPMAPPPSSSQGASSSN
SAGSSSSSSSSAQDAKRAKKSRWN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctaccgaggcatgggcggcggtggattcccgtaccgcaagccagctagttcc
ggcaacaatatgaatgccgtacccccgccaccgatgttgaatgcgcgcggctatgtcggc
cggggcggtagcatcgcgtccctgtcccggggaggaggcagcagtagctccacttccaag
cacggctactcaacgctggactccatcagtcaatatacaaatgccaccaatttagtgggg
aagcggaaacagcacacggatgatgattactttgacgatgacgatgaacccgcccagcag
catcgggacctggagcaggcttacataccggcaccgggctcgccgggagctcctccttca
tcagcgacggcatcttcctccaagcaggactctgattccgatgaggatccgttggaacag
tttatggccggcatcaatcagcaagtggagaaggagaagcgccagcagcagcccaagagt
cagtcgcaggcgatacgcggcgacatcgatgatgaggacgacgaggagagctactatcgg
tacatgaaggagaatccaaccgccggtctgcgggacgatggttctgaccaggaggtggag
tacgatgaggatggcaatccaatagcaccgcccaagaagaaggatattgatccactgcct
cccatatatcattctgaaattgagtacgagcccttcgagaagaacttttacacgcagcac
gaggatatagcggcactggacgaggatcaagtcagagaactgcggcgtacgctaggcgtg
aaggtcaccgggccgtcgccacccaagccagtgacctcctttggccactttgggttcgat
gatgcgctgatcaaggccgtacgcaaggcggagtacacacagcccacgcccatccaggcg
caggcggtgccgacagctctgtccggcagggatatcattggaatagccaagacgggctcc
ggcaagacggctgccttcatttggcctctgctaatgcacctgatggaccagcgggagctc
aaaccgggcgatggtcccatcggtttgattctggccccaaccagggagctctccctgcag
atctacaacgaagccaaaaagtttggcaaggtgtacaacctgaacgtggtctgctgctac
ggtggcggatccaagtgggagcagagcaaggctctcgagcagggtgcagagattatagtt
gccacacccggtcgcatgatcgatatggtcaaaatgaaggccaccaatctaaggagagtg
acgttcctggtgctggacgaagccgatcggatgttccacatgggcttcgagccgcaggtg
cgctccatttgcaaccacgtacgaccggatcgacagaccctgctcttctcagcgaccttt
aagaagcgcatcgaacgcctggcccgggatgtgctctctgatcccgtgcgcatagtccag
ggcgacctgaacgaagccaaccaggacatcacacagtccgtctttgtcttccccaatccg
ctgcaaaagtggaactggctgttgtgccatctggtgaagttcctttcggagggcagcgtc
cttattttcgtgaccaaaaaggcggatgccgagacggtggccaacaacctgttggtgaag
gaatataactgcctgctgctacatggtgacatggatcaggcggacaggaacaaggttatc
atgcagtttaagcgcaaggaatgcgacatcttggtggccaccgatgtcgcagcacgaggc
ttggacatcccgcatatcaggaatgtggtgaactacgatattgcccgggatattgatacg
cacactcaccgcattggcaggactggacgagccggggagaagggtaatgctttcacactg
gtcaccgataaagacaaggagttcgccggtcatctagtgcggaatcttgagggtgcggat
caacaggtgccggacgatctaatggagctggccatgaagagctcctggtttcgtagttcc
cgtttcaagcagggcaaaggaaaaaagcccaccaatactcacaccggcttgggttatcgg
gagcgagagcggggcaatggaacaggcgctggagctggatctggatctgggacgggttca
ggaggagacaggtcagccagtagcagttcctcagaaggagctgtgtccaagtcagcttcc
aacgcgggaccagctaccgatcgatatgcggccatgcgggaagcattccgatcgcagtat
aacaaccagttcagggcttccagcgatcgaacttgggagaagaccctgcccgaagctgga
gtatttgcggcgccaatggcgccaccaccatcgtcctcgcagggcgcttcctcctccaac
tcagccggcagcagcagcagcagcagcagcagtgctcaagatgccaaaagggccaagaag
agccgctggaattga
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integrated database retrieval system
