Dermacentor silvarum: 119446842
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Entry
119446842 CDS
T07348
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
dsv
Dermacentor silvarum
Pathway
dsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119446842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsv03041
]
119446842
Spliceosome [BR:
dsv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119446842
Complex C
U5 SnRNP specific factors
119446842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
119446842
NCBI-ProteinID:
XP_037567333
EnsemblRapid:
LOC119446842
LinkDB
All DBs
Position
3:complement(229144931..229398195)
Genome browser
AA seq
2370 aa
AA seq
DB search
MAGLPPYMLGQPYVMGVLAQQQAMAAQLAAQVHAQMQQQQHLQQQQQLQQQQQQRQQEAI
SEEKLQEKARKWQQLQSKRYAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMSSRKYRHDK
RVYLGALKYMPHAVLKLMENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEAVYIAQWG
TMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQMDLDNDEDSPVCK
WFYDHKPLAETKHMNGVTYRHWNLTLPQMATLYRLANQLLTDLVDDNYFYLFDLKSFFTA
KALNMSIPGGPKFEPLIKDMNPADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNMPHY
VHLSWYHTPNVVYIKTEDPDLPAFYFDPLINPIAHRQGTKQTVDPLPDDEEEFELPEHVQ
PFLQDCPLYTDNTANGIALLWAPRPFNLRSDRTRRAIDIPLVKSWYREHCPPGMPVKVRV
SYQKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGYNMLN
LLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDSHVQYR
LNNVDAFQLADGLQYVFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLVYYRFNTGPVGKGP
GCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLEL
RASVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKM
KADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISAEE
AVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELG
LIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQY
LWYEADKRRLFPPWIKPADSEPPPLLVYKWCQGINNLQDVWDTAEGECNVMLESRFEKMY
EKMDLTLLNRLLRLIVDHNIADYMTAKNNVIINYKDMNHTNSYGIIRGLQFSSFIVQYYG
LVLDLLVLGLQRASEMAGPPQVPNDFLSFQDVATETAHPVRLYSRYIDRIHVFFRFTAEE
ARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSV
TTVQWESSFVSVYSKDNPNLLFNMGGFECRILPKCRMTHEEFSHKDGVWNLQNEVTKERT
AQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELL
DLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQ
TDVGITHFRSGMSHDEDQVIPNLYRYIQPWESEFIDSQRVWAEYALKRQEALAQNRRLTL
EDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLW
NLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSG
LNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKI
HESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFATYKWNVSRPSLL
ADSKDTMDGTTTQKYWIDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGVLIAI
DLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSS
QNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTS
VWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIK
GSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHV
NNERTKVILKPDKTTITEPHHIWPTLTDDEWIKVEVQLKDLILADYGKKNNVNVASLTQS
EIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETQ
SFASKTEWRVRAISATNLHLRTNHIYVSSDDIKEAGYTYILPKNILKKFIIISDLRTQIA
GYLYGASPVDNPQVKEIRCIVIAPQCGSHQGVQLPQALPQHEHLRELEPLGWLHTQPNEL
PQLSPQDVTTHARIMADNPSWDGEKTVIITCSFTPGSCSLTAYKLTPSGYEWGRQNTDRG
NNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHDPNMKYELQLANPKEFY
HEIHRPSHFLNFSSLEEPDSIGNDREDLYA
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcctaccgccatacatgctgggccagccatacgtgatgggtgtgctggcccag
cagcaggccatggcagcccagctggctgcccaagtgcacgcacagatgcaacagcagcag
cacctgcagcagcaacagcagcttcaacagcagcagcagcagcgccagcaggaggccatc
tctgaggagaagcttcaggagaaagcacgaaagtggcagcagctgcagtccaagcgatat
gctgaaaagcgcaagtttggctttgtggatgcacaaaaggaagacatgccacctgagcac
atccgcaagatcattcgggaccatggggacatgagtagtcgcaagtatcggcatgacaag
cgcgtttacctcggggcccttaagtacatgccgcatgcagtgctgaagctgatggaaaac
atgcccatgccatgggagcagatccgagatgtgaaggttctataccatatcaccggagcc
atcacttttgtcaatgagattccctgggtcattgaggctgtctacattgctcagtgggga
actatgtggatcatgatgcgccgagagaagcgtgatcggcgacacttcaagcgcatgcgg
tttcccccctttgatgatgaagagcctccgctggactatgcagacaatgtgctggatgtg
gaacccctggaggccatccagatggacctggacaatgatgaggactcgcctgtctgcaaa
tggttctatgaccataagccccttgcggagaccaagcacatgaatggcgtgacatatcgg
cactggaacctgacgctgccccagatggcaacactgtaccgtctggccaaccagttgctc
actgatttggtggatgacaactacttctacctgtttgacctcaaatccttcttcacggcc
aaggctcttaacatgtcaatcccaggaggacctaagtttgagcccctcatcaaggacatg
aacccagcggatgaagactggaatgaattcaatgacatcaacaaaatcatcatacgccag
cccatccggactgagtacaggattgcctttccatacctgtacaacaacatgccacactat
gtacatctgtcatggtatcacacccccaatgtagtgtacatcaagacggaagaccctgac
ctgccagcattctactttgaccccttgatcaaccctattgcacatcgtcagggcacaaag
caaactgtggaccccttgcctgatgatgaggaggagtttgagctacctgagcatgtgcag
cctttccttcaggattgcccgttatacacagacaacacagccaacggtattgccctgctc
tgggctccacggccattcaacctgcgctcagatcgcactcgtcgtgccattgatattccg
ttggtgaagtcctggtaccgtgagcactgccccccaggcatgcctgtgaaggtcagggtc
tcataccagaagctgctcaagtactttgtgctcaatgcactcaagcaccggccccccaag
ccacagaagaagcgatacctcttccggtcattcaaatcaaccaagttcttccagacgacg
accattgactgggtggaagccggattgcaggtgtgccgccagggctacaatatgctcaat
ctgctgatccaccgcaagaacctgaactacctccacctcgactacaacttcaacctgaag
cctgtcaagacactcaccaccaaggagcgcaagaagagtcgctttggcaatgcgtttcac
ctgtgtcgtgaaattcttcgactcaccaagttggttgtggacagccatgtgcagtaccgg
ctgaacaatgtcgatgccttccagctggcggatgggctacagtatgtatttgcccatgtg
ggccagctgacgggcatgtaccgctacaaatacaagctcatgcgacagatccgcatgtgc
aaggacctcaagcacctcgtctactatcgcttcaacacgggccctgtgggcaaaggaccc
ggctgtggcttctgggcacctggttggcgagtgtggctgttcttcatgcgaggaatcact
ccgctgctggagcgctggctgggtaacctgctgtcccgccagtttgaaggtcgccactcc
aagggtgttgccaagactgtcaccaagcagcgtgtggagagccactttgatctggagctc
agggcctcggtgatgcatgacattctggacatgatgcccgagggcatcaagcaaaacaaa
gcccgcacaatcctgcaacacctgtctgaggcctggcgctgctggaaggccaacattcca
tggaaggtgcctggcctaccaattcccattgagaacatgatcctgcgctacgtgaagatg
aaggccgactggtggaccaacacggcccactacaaccgggagcgcatccgtcgtggagcc
actgtggacaagacagtctgcaagaagaacctgggccggctgacgcggctctacctaaag
gccgagcaggagaggcagcacaactacctcaaggatggcccttacatcagcgctgaggag
gccgttgccatctacacgactactgtgcattggctggagagccgccgcttctcacccatc
cccttcccaccactgtcgtacaagcacgacaccaagctgctcattttggccctggagagg
ctcaaggaggcttacagtgtgaagagtcggctgaaccagtcgcagcgagaggagctgggg
ctcattgagcaggcctacgacaaccctcacgaggcactgtcacgcattaagcgacacctg
ctcacgcagagagctttcaaagaggtgggcatagagttcatggacctgtacagccacttg
atccctgtatacgacgtagagcccctggagaagatcactgacgcttacctggatcagtat
ctgtggtacgaggcagacaagcggcgcctctttccaccctggatcaagccagcagactca
gagccaccacccttacttgtgtacaagtggtgtcagggcatcaacaacctgcaggacgtg
tgggacactgctgagggtgagtgtaatgtcatgctcgagtcacgctttgagaagatgtac
gagaagatggacctgacgttgctcaaccggcttctgcgcctcattgtggatcacaacatt
gctgactacatgacggccaagaacaatgtcatcatcaactacaaggacatgaatcatacc
aactcgtatggcatcatccgcggcctgcagttctcctccttcattgtccagtactacgga
ctggtgctggatttgctggtgttgggactgcagcgggcctccgagatggcggggcccccg
caggtgccgaacgatttcctctccttccaggacgttgccacggagactgcacatcctgtg
cgcctctactcacgctacatcgaccgcatacacgtcttcttcaggttcactgccgaagaa
gcaagagacctgatccagcgctacctgacggagcaccctgacccaaacaatgagaacatt
gttgggtacaacaacaagaagtgttggcccagagatgcccgtatgcgtctcatgaagcat
gatgttaacctgggccgtgcagtgttttgggacatcaagaaccgactgccgcgatcagtg
acaacagtgcagtgggagagcagctttgtgtcggtgtacagcaaggacaaccccaatctg
ctgttcaacatgggtggcttcgagtgccgcatcttacccaagtgccgtatgacccatgag
gagttcagccacaaggatggcgtctggaacctgcagaatgaggtgaccaaagaaaggaca
gcgcagtgcttcctccgtgtggatgacgaatcgatgcagcgtttccacaatcgagtgcga
caaatcctcatggcgtctggatcgaccactttcacaaagattgtgaacaagtggaacaca
gcactgattggcctgatgacctacttccgggaggctgtcgtaaacactcaagagctgctt
gacctgcttgtcaagtgcgagaacaaaatccagacccgaatcaagattggtctcaactct
aagatgcccagccgcttcccacctgtggtgttctacacccccaaggaactggggggcctc
ggcatgctgtccatgggccacgtgctcatcccacagtcggacctcaggtggtcgaagcag
acggacgtgggcatcacacacttccggtcaggcatgagccacgacgaagaccaggtgatc
ccaaatttgtaccgttacattcagccttgggagagtgaattcattgactcccagcgtgtg
tgggctgagtatgccttgaaacgccaagaggcattggcacagaacagacgcctcacgttg
gaagacttggaggacagctgggatcgtggcatcccacgaatcaacactctattccagaaa
gaccgacatacactggcctatgacaaaggctggcgcgtgcgtacggacttcaagcaatac
caggtgctgaagcagaacccattttggtggacccaccagaggcatgacggcaagctgtgg
aacttgaacaactaccgaacagatatgatccaagccctgggtggtgtggagggcattctg
gagcataccctcttcaagggaacctactttcccacctgggaaggtctcttttgggaaaag
gccagtgggtttgaagagtcaatgaagtacaagaaactgacgaatgcacagcgttctgga
ctgaaccagatccccaaccggcgcttcaccctctggtggtcacccaccattaatcgtgcc
aatgtgtatgtgggcttccaggtgcagctggacctaactggcatcttcatgcacggcaag
atccccacgctcaagatctcgctcatccagatattccgagctcacctgtggcagaaaatc
catgagagtattgtcatggacttgtgccaggtcttcgaccaagagctagatgccttggaa
attgagaccgtacagaaggaaacaatccacccacggaaatcctacaagatgaacagctct
tgtgctgatgtgttgctctttgccacttacaagtggaatgtctcccggccatcccttctg
gctgactcaaaggacaccatggatggcacgacaacacagaaatactggattgatgtgcag
ctacgatggggcgactacgactctcatgatgtggaacgttatgccagagccaagttcctg
gactacacaactgacaacatgagcatatacccctcgcccacaggcgtgcttattgccatt
gacctggcctacaacttgcacagtgcatatggcaactggttcccgggctgtaaaccactc
atccagcaggccatggcaaagatcatgaaggccaacccagcattgtatgtgctgcgtgaa
cgcattcgcaagggtctccagctgtactcttctgagcccactgagccttacctcagctcc
cagaactatggcgagctcttctctaaccagatcatctggtttgttgacgacaccaacgtc
taccgtgtcaccatccataagacctttgaagggaacctgacaaccaagcccatcaatggt
gccatcttcatcttcaacccacgcactggacagctgttcctcaagatcatccacacttca
gtgtgggctggccaaaaacgtctgggacagctggccaaatggaagacagcagaagaagtg
gctgcccttatccggtcactgcctgtggaagaacaacccaagcaaatcattgtgactcgc
aagggtatgctggacccgctggaagtgcacctgttggacttccccaacattgtcatcaag
ggcagtgagctgcagctgcccttccaggcgtgcctcaaggtggagaagtttggggacctg
atcctgaaggccaccgagccacagatggtgctgttcaacttgtacgacgattggctcaag
accatctcctcctacacggctttctcacgtctcatactcatcctgcgtgcccttcacgtc
aacaatgagcgcaccaaggtgatcctcaagcccgataagaccactatcactgagccgcac
cacatatggcccaccctcactgacgacgagtggatcaaggttgaagtgcagcttaaggac
ctcatcctggctgactatggcaaaaagaacaacgtaaatgtggcctcattgacacaatcc
gagattcgtgacatcatcctcggcatggagatctcagccccatcagctcagcggcaacag
attgcagagattgagaagcagaccaaggagcagtctcagctgacagccaccaccacccgc
actgtaaacaagcacggtgatgagataatcacctccacaaccagcaactatgaaacgcaa
tcttttgcctccaagactgaatggcgtgtacgagccatctcggcaacaaacctgcacctg
cgtactaaccacatctacgtttcctctgacgatatcaaggaagctggctacacctacatc
cttcccaagaacatcctcaagaagtttatcatcatctcagatttgaggacacagattgct
ggctacctgtacggggcgagccccgtcgataacccacaggtcaaggagattcggtgcata
gtgatagcacctcagtgtggcagccaccaaggggtgcagctgccacaggctctgccccag
cacgagcatctgcgcgagctggaacccctgggctggctgcacacgcagccaaacgagctg
cctcagctgtcgccccaggacgtgaccacacacgcccgcatcatggctgacaacccctcg
tgggatggagagaagacggtcatcatcacttgcagctttacgcctggctcctgctccctg
actgcatacaagctgaccccaagtggctacgagtggggccgccagaacactgaccgaggc
aacaacccaaagggctacttgccgtcacactacgagcgggtccagatgctgctgtcagac
cgctttcttggctttttcatggtgcctgcacagggatcttggaactacaacttcatgggt
gtgcggcatgacccaaacatgaagtatgaactgcagctcgccaatcccaaagagttttac
catgagattcacagaccttcacacttcctcaacttcagcagcctggaggagccagattct
attggcaatgatagagaggacctttacgcgtga
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integrated database retrieval system
