Desulfolutivibrio sulfoxidireducens: GD604_09035
Help
Entry
GD604_09035 CDS
T06821
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
dsx
Desulfolutivibrio sulfoxidireducens
Pathway
dsx02020
Two-component system
dsx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dsx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GD604_09035 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GD604_09035 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsx03021
]
GD604_09035 (rpoN)
Transcription machinery [BR:
dsx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GD604_09035 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
z-alpha
MutS_III
Motif
Other DBs
NCBI-ProteinID:
QLA19867
LinkDB
All DBs
Position
2048429..2049862
Genome browser
AA seq
477 aa
AA seq
DB search
MALELRQQLKLSQQLVMTPQLQQAIKLLQLSRLELVESIQQELMENPLLEEVLEEEKPER
VMVEEEHGPLPGGEDTAIEKELLKSAEWDDYLGDFASTPVQSHIRETEIPEEGMAFDARL
SSKPSLEGHLDWQMRLSNFTARELAIGEAICGSLDSSGYLAATAEELAGMTGTTIEEVEA
VLYRVQRLDPVGVAARNPRECLLVQMEVLEYTDPILLELVSEHLEDLEKKRYKPLVKKFR
ISMEQLKAYLDTIQSLDPLPGASFGSSDPIYVSPDAYIYKYENDFIILLNEEGLPRLQLN
ALYMEGFKPKGDKERDYIQDKKRSAEWLMKSLYQRQRTLYKVLESIVRFQRGFFDDGVNK
LRPLILKDVADDINMHESTVSRITSNKYVATPHGIFELKFFFNSSLELDDGSTVGSESVK
ATIRQLIASEDPKKPVSDEAIADILKETLQINIARRTVAKYRTAMDIASSSKRKEVF
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggaactgcggcaacaactcaaactttcgcagcagttggtgatgactccccaa
ctgcagcaggccataaagctgttgcaactctcacggcttgaacttgtggagagcatccag
caggagcttatggagaatcctctcctggaggaggtcctggaggaggagaagccggaacgg
gtcatggtcgaagaggagcacggccccctgcccggcggcgaagacacggccatcgagaag
gagcttttgaaaagcgccgagtgggacgactacctcggtgatttcgccagcaccccggtg
caatcccacatccgggagacggagatccccgaggagggcatggccttcgacgccaggctg
tcctccaagccctccctggaaggccatctggattggcagatgcgtctgtcaaatttcacc
gcacgggaactcgccatcggcgaggccatttgcggcagtctcgattcctctggatatctt
gcggccacggccgaggaactggccggcatgaccgggaccacgatcgaggaagtggaggcc
gtgctgtaccgggtgcagcgtctcgatcccgtgggcgtggccgccaggaatccccgggag
tgtctcctggtccagatggaggtcctcgaatataccgatccgattttgcttgagctggtc
tccgaacacctggaagacctggaaaaaaagcgctacaagcccctggtcaaaaagttccgg
atcagcatggagcagctcaaggcctatctggacaccatccaaagccttgaccccctgccc
ggggccagtttcggctccagcgatcccatctacgtcagtcccgacgcctacatctacaaa
tacgaaaacgacttcatcatcctgctcaacgaggaagggctgccccggctccagttgaac
gccctgtatatggagggcttcaagccaaagggcgacaaggagcgggactacatccaggac
aagaagcgctcggcggaatggctcatgaaaagcctctatcagcgccagcgtaccttgtac
aaggtgcttgagagcatcgtgcgttttcagcgcggttttttcgatgatggggtgaacaag
ctgcgtccgttgatcctcaaggacgtagccgacgacatcaatatgcacgaatccacggtc
agccggatcacctccaacaaatacgtggccaccccgcacggcatcttcgaactcaagttt
tttttcaacagctccctggaactcgacgatggcagcactgtgggatcggaatcggtcaag
gccaccatccggcaactcatcgcctccgaggatccgaaaaagcccgtgagcgacgaggcc
atcgccgatatcctcaaggaaacgctgcaaatcaacatcgcccggcgcaccgtggccaaa
tatcggacggctatggatatcgcctcgtcgtccaaacgcaaggaagtgttttga
DBGET
integrated database retrieval system
