KEGG   Desulfomonile tiedjei: Desti_0133Help
Entry
Desti_0133        CDS       T02147                                 

Definition
(GenBank) DNA polymerase LigD, polymerase domain protein
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
dti  Desulfomonile tiedjei
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dti00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Desti_0133
Enzymes [BR:dti01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Desti_0133
DNA repair and recombination proteins [BR:dti03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Desti_0133
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
163464..164393
Genome map
AA seq 309 aa AA seqDB search
MKHTRSDNTKSSITIEGKKLHLTNLDKVLYPATGFTKGQVIEYYAKISEVLLPHVKNRPL
TLKRYPNGVDGEYFYEKMCPSHHPDWIQTTRVASQHRKFVDYCTIDGLASLIWVANLASL
ELHTSLSHSDNVLRPSMIVFDLDPGEPAGLLQCVEVSLIFRDMLRDLGLAGFAKTSGGKG
LHLYVPLNTETDYDRTKTFAQALARSLAKRMPKLVTANMRKDLRKGKVFVDWSQNDDHKT
TVCVYSLRAREKPTVSAPIAWSTLETCHKKKNASGLVLDTEQVLKQVEKEGDLFAEVVSL
RQKLPELAV
NT seq 930 nt NT seq  +upstreamnt  +downstreamnt
gtgaaacatacacgatctgacaataccaaatcatcgataaccatcgaaggtaaaaagctc
cacctgacgaatctcgataaagtgctttatcccgcaaccggttttaccaaaggccaggtg
atcgaatactacgcgaaaatttctgaggttcttcttccgcacgtgaagaatagacctctc
accttgaaacgatatccgaacggcgttgacggagaatacttctacgagaagatgtgtccg
tcacatcatccggactggatacagaccacccgtgttgcgagtcagcaccgaaagttcgtg
gattattgcaccatcgacggtcttgcgtctttgatctgggtggccaatcttgcctctctt
gagctgcatacctcgctttctcattcggataatgtgcttcgaccttccatgatagtcttc
gatctcgatccgggggagcctgcaggattgcttcaatgcgttgaagtgtcgctcatcttt
cgagacatgttgcgggatctggggttggccggtttcgcgaagaccagtggaggaaaaggt
cttcacctgtacgttccattgaacacggaaactgattacgatcgtaccaaaacatttgcg
caagctcttgccaggtcattggccaaacgcatgccgaaactcgtcactgcaaacatgaga
aaggatctgcgtaaaggaaaagtgttcgtggactggagccaaaacgacgatcacaaaaca
acggtgtgcgtgtattccttgagagcacgcgaaaagccgaccgtatctgctccaatagcg
tggagtacccttgaaacctgccataaaaagaaaaatgcttccggccttgtcctggatacc
gaacaggtgctcaagcaagtcgaaaaagaaggcgacctctttgcggaagtggtttcattg
agacaaaagcttccggaactcgcggtgtga

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